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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG96682 Soybean cytosol 84.95 83.73
CDY67155 Canola cytosol 63.59 81.37
Bra030777.1-P Field mustard cytosol 94.17 45.75
CDY31092 Canola cytosol 94.17 45.75
AT1G09430.1 Thale cress cytosol 93.2 45.28
Solyc01g101040.2.1 Tomato plastid 87.86 42.79
PGSC0003DMT400047154 Potato cytosol 87.86 42.79
EES16175 Sorghum cytosol 86.89 42.42
KRH68403 Soybean mitochondrion 86.41 42.08
VIT_14s0060g00550.t01 Wine grape cytosol 86.41 42.08
GSMUA_Achr11P... Banana cytosol 86.41 42.08
Os12t0566300-01 Rice plastid 85.92 41.84
EES09011 Sorghum cytosol 85.44 41.61
Zm00001d041593_P001 Maize extracellular, plasma membrane 84.95 41.47
GSMUA_Achr1P15970_001 Banana mitochondrion 84.95 41.37
GSMUA_Achr8P06210_001 Banana cytosol 84.95 41.37
Os11t0696200-01 Rice cytosol 84.95 41.37
TraesCS5B01G090600.1 Wheat cytosol 84.47 41.13
TraesCS5D01G097100.1 Wheat golgi, unclear 84.47 41.13
TraesCS5A01G084700.1 Wheat unclear 83.98 40.9
HORVU5Hr1G022100.2 Barley cytosol 83.5 40.66
CDY32179 Canola cytosol 83.98 40.61
HORVU4Hr1G028600.1 Barley cytosol 83.01 40.52
CDY40500 Canola cytosol 82.52 40.19
CDY54767 Canola cytosol 82.52 40.19
CDY70177 Canola cytosol 82.52 40.19
TraesCS4D01G142600.1 Wheat cytosol 82.52 39.63
TraesCS4B01G144000.2 Wheat cytosol 82.52 39.44
TraesCS4A01G172800.1 Wheat cytosol 82.04 39.21
Zm00001d048627_P001 Maize extracellular, plasma membrane 84.95 38.63
CDY20608 Canola cytosol 81.07 37.53
CDY20965 Canola cytosol 81.55 37.33
Zm00001d018129_P002 Maize extracellular 15.53 35.56
Zm00001d010708_P001 Maize extracellular 21.36 23.4
Zm00001d031177_P001 Maize cytosol 16.5 18.09
Zm00001d050894_P001 Maize cytosol 16.99 17.59
Zm00001d018888_P001 Maize cytosol 13.59 16.0
Os11t0693800-01 Rice plasma membrane 4.37 3.46
HORVU5Hr1G013770.1 Barley cytosol 0.49 0.61
Protein Annotations
KEGG:00020+2.3.3.8KEGG:00020+6.2.1.5KEGG:00640+6.2.1.5KEGG:00660+6.2.1.5KEGG:00720+2.3.3.8KEGG:00720+6.2.1.5
Gene3D:3.40.50.261MapMan:5.1.1.2.1UniProt:A0A078H112EnsemblPlants:CDY31089ProteinID:CDY31089ProteinID:CDY31089.1
InterPro:Citrate-bdEnsemblPlantsGene:GSBRNA2T00047170001InterPro:IPR016102PFAM:PF16114PANTHER:PTHR23118PANTHER:PTHR23118:SF9
MetaCyc:PWY-5172MetaCyc:PWY-5392MetaCyc:PWY-5537MetaCyc:PWY-5538MetaCyc:PWY-5690MetaCyc:PWY-5913
MetaCyc:PWY-6728MetaCyc:PWY-6969MetaCyc:PWY-7384SUPFAM:SSF52210InterPro:Succinyl-CoA_synth-likeUniPathway:UPA00223
UniParc:UPI0004EE92EB:::::
Description
BnaA08g26390DBnaA08g26390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H112]
Coordinates
chrLK032267:-:200716..202545
Molecular Weight (calculated)
22424.0 Da
IEP (calculated)
8.452
GRAVY (calculated)
-0.192
Length
206 amino acids
Sequence
(BLAST)
001: MTQLPSKNFN KWGDIKFHLP FGRVLSPTES FIHGLDEKTS ASLKFTVLNP KGRTWTMVAG GGASVINADT VGDLGYASEL RNYAEYSGAP NEEEVLQYAR
101: VVIDCATADP DGRKRALLIG GGIANFTDVA ATFNGIIRAL REKETRLKAA RMHIYVRRGG PNYQTGLARM RALGEELGVP LEVYGPEATM TGICKRAIDC
201: IMLPDA
Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)
001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
Arabidopsis Description
ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.