Factsheet for GSMUA_Achr11P25260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06210_001	Banana	cytosol	95.27	95.27
PGSC0003DMT400047154	Potato	cytosol	91.73	91.73
Solyc01g101040.2.1	Tomato	plastid	91.73	91.73
VIT_14s0060g00550.t01	Wine grape	cytosol	91.02	91.02
Os11t0696200-01	Rice	cytosol	90.78	90.78
EES16175	Sorghum	cytosol	90.31	90.52
Os12t0566300-01	Rice	plastid	90.07	90.07
KRG96682	Soybean	cytosol	44.44	89.95
HORVU5Hr1G022100.2	Barley	cytosol	89.6	89.6
TraesCS5D01G097100.1	Wheat	golgi, unclear	89.6	89.6
Zm00001d041593_P001	Maize	extracellular, plasma membrane	89.36	89.57
GSMUA_Achr1P15970_001	Banana	mitochondrion	89.36	89.36
TraesCS5B01G090600.1	Wheat	cytosol	89.36	89.36
TraesCS5A01G084700.1	Wheat	unclear	89.36	89.36
CDY31092	Canola	cytosol	88.89	88.68
EES09011	Sorghum	cytosol	88.65	88.65
HORVU4Hr1G028600.1	Barley	cytosol	88.18	88.39
Bra030777.1-P	Field mustard	cytosol	88.18	87.97
KRH68403	Soybean	mitochondrion	87.71	87.71
AT1G09430.1	Thale cress	cytosol	87.71	87.5
TraesCS4D01G142600.1	Wheat	cytosol	88.65	87.41
TraesCS4B01G144000.2	Wheat	cytosol	88.42	86.77
TraesCS4A01G172800.1	Wheat	cytosol	88.18	86.54
CDY31089	Canola	plastid	42.08	86.41
CDY32179	Canola	cytosol	85.34	84.74
Zm00001d048627_P001	Maize	extracellular, plasma membrane	89.6	83.66
Os11t0693800-01	Rice	plasma membrane	48.7	79.23
CDY67155	Canola	cytosol	29.31	77.02
Zm00001d018888_P001	Maize	cytosol	29.31	70.86
Zm00001d031177_P001	Maize	cytosol	30.5	68.62
Zm00001d018129_P002	Maize	extracellular	14.42	67.78
Zm00001d050894_P001	Maize	cytosol	30.73	65.33
HORVU5Hr1G013770.1	Barley	cytosol	25.06	64.24
Zm00001d010708_P001	Maize	extracellular	17.02	38.3

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1
InterPro:Citrate-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
EnsemblPlantsGene:GSMUA_Achr11G25260_001	EnsemblPlants:GSMUA_Achr11P25260_001	EnsemblPlants:GSMUA_Achr11T25260_001	InterPro:IPR013815	InterPro:IPR016102	UniProt:M0RVA6
PFAM:PF08442	PFAM:PF16114	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	SUPFAM:SSF52210	SUPFAM:SSF56059
InterPro:Succinyl-CoA_synth-like	UniParc:UPI000295B568	SEG:seg	:	:	:

Description

Putative ATP-citrate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr11G25260_001]

Coordinates

chr11:-:24446137..24450710

Molecular Weight (calculated)

46650.5 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.126

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLAGIDLQIR SVQVTESTDF NELVNKEPWL SSMKLVVKPD MLFGKRGKSG LVALNLDLAQ AAQFVKERLG VEVEMGGCKA
101: PITTFIIEPF VPHDQEYYLS IVSERLGCTV SFSECGGIEI EENWDKVKTV YLPTEKPMTG EACAPLIATL PLEVRGKIGD FIKGVFTVFQ DLDFSFIEMN
201: PFTLVNGEPY PLDMRGELDD TAAFKNFKKW GGIDFPLPFG RVLSPTEKFV HELDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV LDCATADPDG RKRALLIGGG IANFTDVAAT FNGIIRALKE KESKLKAARM HIYVRRGGPN YQTGLAKMRK VGEELGVPLE
401: VYGPEATMTG ICKEAIDCVM SAA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.