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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31089 Canola plastid 81.37 63.59
KRG96682 Soybean cytosol 72.67 55.98
Bra030777.1-P Field mustard cytosol 85.71 32.55
CDY31092 Canola cytosol 85.71 32.55
AT1G09430.1 Thale cress cytosol 85.71 32.55
VIT_14s0060g00550.t01 Wine grape cytosol 77.64 29.55
Solyc01g101040.2.1 Tomato plastid 77.64 29.55
PGSC0003DMT400047154 Potato cytosol 77.64 29.55
GSMUA_Achr11P... Banana cytosol 77.02 29.31
EES16175 Sorghum cytosol 76.4 29.15
KRH68403 Soybean mitochondrion 76.4 29.08
Os12t0566300-01 Rice plastid 76.4 29.08
EES09011 Sorghum cytosol 76.4 29.08
GSMUA_Achr1P15970_001 Banana mitochondrion 75.78 28.84
GSMUA_Achr8P06210_001 Banana cytosol 75.78 28.84
HORVU4Hr1G028600.1 Barley cytosol 75.16 28.67
Os11t0696200-01 Rice cytosol 75.16 28.61
Zm00001d041593_P001 Maize extracellular, plasma membrane 74.53 28.44
TraesCS5D01G097100.1 Wheat golgi, unclear 73.91 28.13
TraesCS5B01G090600.1 Wheat cytosol 73.91 28.13
HORVU5Hr1G022100.2 Barley cytosol 73.29 27.9
TraesCS5A01G084700.1 Wheat unclear 73.29 27.9
TraesCS4D01G142600.1 Wheat cytosol 73.91 27.74
TraesCS4B01G144000.2 Wheat cytosol 73.91 27.61
CDY32179 Canola cytosol 72.67 27.46
CDY54767 Canola cytosol 72.05 27.42
CDY40500 Canola cytosol 72.05 27.42
CDY70177 Canola cytosol 72.05 27.42
TraesCS4A01G172800.1 Wheat cytosol 73.29 27.38
Zm00001d048627_P001 Maize extracellular, plasma membrane 75.78 26.93
CDY20608 Canola cytosol 71.43 25.84
CDY20965 Canola cytosol 71.43 25.56
Zm00001d010708_P001 Maize extracellular 11.18 9.57
Zm00001d018129_P002 Maize extracellular 4.35 7.78
Zm00001d050894_P001 Maize cytosol 8.07 6.53
Zm00001d031177_P001 Maize cytosol 7.45 6.38
Os11t0693800-01 Rice plasma membrane 6.21 3.85
Zm00001d018888_P001 Maize cytosol 3.73 3.43
HORVU5Hr1G013770.1 Barley cytosol 1.86 1.82
Protein Annotations
KEGG:00020+2.3.3.8KEGG:00020+6.2.1.5KEGG:00640+6.2.1.5KEGG:00660+6.2.1.5KEGG:00720+2.3.3.8KEGG:00720+6.2.1.5
Gene3D:3.40.50.261MapMan:5.1.1.2.1UniProt:A0A078JL59EnsemblPlants:CDY67155ProteinID:CDY67155ProteinID:CDY67155.1
InterPro:Citrate-bdEnsemblPlantsGene:GSBRNA2T00059654001InterPro:IPR016102PFAM:PF16114PANTHER:PTHR23118PANTHER:PTHR23118:SF9
MetaCyc:PWY-5172MetaCyc:PWY-5392MetaCyc:PWY-5537MetaCyc:PWY-5538MetaCyc:PWY-5690MetaCyc:PWY-5913
MetaCyc:PWY-6728MetaCyc:PWY-6969MetaCyc:PWY-7384SUPFAM:SSF52210InterPro:Succinyl-CoA_synth-likeUniPathway:UPA00223
UniParc:UPI0004EF37D2:::::
Description
BnaCnng53790DBnaCnng53790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JL59]
Coordinates
chrLK035813:-:313..1171
Molecular Weight (calculated)
17893.7 Da
IEP (calculated)
7.741
GRAVY (calculated)
-0.152
Length
161 amino acids
Sequence
(BLAST)
001: MLIERKCYYE DSKQFLTLCL SVFNKVGDLG YASELGNYAE YSGAPNEEEV LQYARLVIDC ATADPDGRKR ALLIGGGIAN FTDVAAIFNC IIRTLRKKET
101: RLKSSRMHIY VRRGGPNYQN GLARMRALGE ELGVPLEVYG PEATMTGICK RAIDCIMLPD A
Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)
001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
Arabidopsis Description
ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.