Factsheet for GSMUA_Achr8P06210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	95.27	95.27
PGSC0003DMT400047154	Potato	cytosol	90.78	90.78
Solyc01g101040.2.1	Tomato	plastid	90.31	90.31
VIT_14s0060g00550.t01	Wine grape	cytosol	90.07	90.07
KRG96682	Soybean	cytosol	44.21	89.47
Os11t0696200-01	Rice	cytosol	89.36	89.36
Os12t0566300-01	Rice	plastid	88.42	88.42
EES16175	Sorghum	cytosol	88.18	88.39
GSMUA_Achr1P15970_001	Banana	mitochondrion	88.18	88.18
HORVU5Hr1G022100.2	Barley	cytosol	88.18	88.18
TraesCS5D01G097100.1	Wheat	golgi, unclear	88.18	88.18
TraesCS5B01G090600.1	Wheat	cytosol	87.94	87.94
TraesCS5A01G084700.1	Wheat	unclear	87.94	87.94
CDY31092	Canola	cytosol	87.94	87.74
EES09011	Sorghum	cytosol	87.47	87.47
HORVU4Hr1G028600.1	Barley	cytosol	87.23	87.44
AT1G09430.1	Thale cress	cytosol	87.47	87.26
Zm00001d041593_P001	Maize	extracellular, plasma membrane	87.0	87.2
Bra030777.1-P	Field mustard	cytosol	87.23	87.03
TraesCS4D01G142600.1	Wheat	cytosol	87.94	86.71
KRH68403	Soybean	mitochondrion	86.29	86.29
TraesCS4B01G144000.2	Wheat	cytosol	87.71	86.08
TraesCS4A01G172800.1	Wheat	cytosol	87.47	85.85
CDY31089	Canola	plastid	41.37	84.95
CDY32179	Canola	cytosol	83.92	83.33
Zm00001d048627_P001	Maize	extracellular, plasma membrane	87.94	82.12
Os11t0693800-01	Rice	plasma membrane	47.28	76.92
CDY67155	Canola	cytosol	28.84	75.78
Zm00001d018888_P001	Maize	cytosol	28.37	68.57
Zm00001d018129_P002	Maize	extracellular	14.18	66.67
Zm00001d031177_P001	Maize	cytosol	29.55	66.49
Zm00001d050894_P001	Maize	cytosol	29.79	63.32
HORVU5Hr1G013770.1	Barley	cytosol	23.88	61.21
Zm00001d010708_P001	Maize	extracellular	16.55	37.23

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1
InterPro:Citrate-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
EnsemblPlantsGene:GSMUA_Achr8G06210_001	EnsemblPlants:GSMUA_Achr8P06210_001	EnsemblPlants:GSMUA_Achr8T06210_001	InterPro:IPR013815	InterPro:IPR016102	UniProt:M0TN24
PFAM:PF08442	PFAM:PF16114	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	SUPFAM:SSF52210	SUPFAM:SSF56059
InterPro:Succinyl-CoA_synth-like	UniParc:UPI000294FA15	SEG:seg	:	:	:

Description

Putative ATP-citrate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr8G06210_001]

Coordinates

chr8:-:4038371..4042266

Molecular Weight (calculated)

46627.4 Da

IEP (calculated)

5.885

GRAVY (calculated)

-0.143

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLAGTDLQIR SAQVTESTDF NELVNKEPWI SSTKLVVKPD MLFGKRGKSG LVALNLDLAQ AAQFVKERLG TEVEMGGCKA
101: PITTFIIEPF IPHDQEYYLS IVSERLGCTI SFSECGGIEI EENWDKVKTV YLPTEKSMAS EACAPLIVTL PLEVRGKIGD FIKGVLTVFQ DLDFSFIEMN
201: PFTLVNGEPY PLDMRGELDD TAAFKNFKKW GSIEFPLPFG RVLSSTEKFV HELDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLKYARVV LDCATADPDG RKRALLIGGG IANFTDVAAT FNGIIKALKE KESKLKAARM HIYVRRGGPN YQTGLAKMRK LGEELGIPLE
401: VYGPEATMTG ICKQAIDCVM SAA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.