Factsheet for HORVU4Hr1G028600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G142600.1	Wheat	cytosol	97.39	95.8
TraesCS4B01G144000.2	Wheat	cytosol	97.16	95.13
TraesCS4A01G172800.1	Wheat	cytosol	96.92	94.9
Os11t0696200-01	Rice	cytosol	94.31	94.09
EES09011	Sorghum	cytosol	93.36	93.14
HORVU5Hr1G022100.2	Barley	cytosol	89.34	89.13
KRG96682	Soybean	cytosol	44.08	89.0
GSMUA_Achr11P...	Banana	cytosol	88.39	88.18
GSMUA_Achr1P15970_001	Banana	mitochondrion	88.39	88.18
KRH68403	Soybean	mitochondrion	88.39	88.18
Solyc01g101040.2.1	Tomato	plastid	88.15	87.94
PGSC0003DMT400047154	Potato	cytosol	88.15	87.94
VIT_14s0060g00550.t01	Wine grape	cytosol	88.15	87.94
GSMUA_Achr8P06210_001	Banana	cytosol	87.44	87.23
CDY31092	Canola	cytosol	86.97	86.56
Zm00001d048627_P001	Maize	extracellular, plasma membrane	92.42	86.09
Bra030777.1-P	Field mustard	cytosol	86.02	85.61
AT1G09430.1	Thale cress	cytosol	85.55	85.14
Os11t0693800-01	Rice	plasma membrane	51.42	83.46
CDY31089	Canola	plastid	40.52	83.01
CDY32179	Canola	cytosol	83.65	82.86
CDY67155	Canola	cytosol	28.67	75.16
Zm00001d018888_P001	Maize	cytosol	30.09	72.57
Zm00001d031177_P001	Maize	cytosol	31.52	70.74
Zm00001d050894_P001	Maize	cytosol	31.52	66.83
Zm00001d018129_P002	Maize	extracellular	13.98	65.56
HORVU5Hr1G013770.1	Barley	cytosol	25.12	64.24
Zm00001d010708_P001	Maize	extracellular	16.82	37.77

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1
InterPro:Citrate-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU4Hr1G028600
EnsemblPlants:HORVU4Hr1G028600.1	InterPro:IPR013815	InterPro:IPR016102	UniProt:M0XR76	PFAM:PF08442	PFAM:PF16114
PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	SUPFAM:SSF52210	SUPFAM:SSF56059	InterPro:Succinyl-CoA_synth-like	UniParc:UPI0002968D20

Description

No Description!

Coordinates

chrchr4H:-:178037024..178040492

Molecular Weight (calculated)

46641.4 Da

IEP (calculated)

5.579

GRAVY (calculated)

-0.090

Length

422 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLAAIDLHIL SAQVTQSTDF AELVNQHPWL STTKLVVKPD MLFGKRGKSG LVALNLDVAQ VKEFVKDRLG VEVEMGVCKA
101: PITTFIVEPF VPHDQEYYLS IVSERLGSTI SFSECGGIEI EENWDKVKTV FLPTEKPMTP DACAPLIATL PLEARGKIGD FIKGVFAVFQ DLDFSFIEMN
201: PFTMVNEEPY PLDMRGELDD TASFKNFKKW GNVEFPLPFG RVLSSTESFI HELDDKTSAS LKFTVLNTKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV LDCATADPDG RKRALLIGGG IANFTDVAAT FSGIIRALRE KESKLKASRM YLYVRRGGPN YQTGLAKMRK LGAEIGVPIE
401: VYGPEATMTG ICKQAIECIM AA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.