Factsheet for Zm00001d010708_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018129_P002	Maize	extracellular	39.36	82.22
Zm00001d018888_P001	Maize	cytosol	34.57	37.14
Zm00001d031177_P001	Maize	cytosol	35.11	35.11
Zm00001d050894_P001	Maize	cytosol	35.64	33.67
KRG96682	Soybean	cytosol	27.66	24.88
CDY31089	Canola	plastid	23.4	21.36
EES09011	Sorghum	cytosol	40.43	17.97
Zm00001d041593_P001	Maize	extracellular, plasma membrane	39.89	17.77
Solyc01g101040.2.1	Tomato	plastid	39.89	17.73
PGSC0003DMT400047154	Potato	cytosol	39.89	17.73
CDY32179	Canola	cytosol	39.36	17.37
Os11t0696200-01	Rice	cytosol	38.83	17.26
GSMUA_Achr1P15970_001	Banana	mitochondrion	38.83	17.26
Zm00001d048627_P001	Maize	extracellular, plasma membrane	41.49	17.22
GSMUA_Achr11P...	Banana	cytosol	38.3	17.02
VIT_14s0060g00550.t01	Wine grape	cytosol	38.3	17.02
Bra030777.1-P	Field mustard	cytosol	38.3	16.98
CDY31092	Canola	cytosol	38.3	16.98
HORVU4Hr1G028600.1	Barley	cytosol	37.77	16.82
TraesCS4D01G142600.1	Wheat	cytosol	37.77	16.55
GSMUA_Achr8P06210_001	Banana	cytosol	37.23	16.55
KRH68403	Soybean	mitochondrion	37.23	16.55
AT1G09430.1	Thale cress	cytosol	37.23	16.51
TraesCS4B01G144000.2	Wheat	cytosol	37.77	16.47
TraesCS4A01G172800.1	Wheat	cytosol	37.77	16.47
Os11t0693800-01	Rice	plasma membrane	18.62	13.46
Zm00001d040984_P001	Maize	cytosol	6.38	12.24
CDY67155	Canola	cytosol	9.57	11.18
Zm00001d037566_P002	Maize	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d010708_P001	EnsemblPlants:Zm00001d010708_T001	EnsemblPlantsGene:Zm00001d010708	Gene3D:3.30.470.20	PANTHER:PTHR23118	PANTHER:PTHR23118:SF9
ProteinID:AQK94633.1	UniParc:UPI0008432156	UniProt:A0A1D6FSU6	MapMan:35.1	:	:

Description

ATP-citrate synthase alpha chain protein 3

Coordinates

chr8:+:125234326..125235450

Molecular Weight (calculated)

21311.7 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.255

Length

188 amino acids

Sequence
(BLAST)

001: MFIIIMLRLH TDFSFLEMNP FAMVNREPYP LDIRGELDDT TAFKNFKKWG GIEFPLPFGR VLSPTESFIH ELDEKVLISG LCCSSFALRL DLNLRTMFVG
101: LSPCFGPHPP KRAEEQMKAQ GREEEPAVGV RRGCHRHARP GREHHVGPHA VDAIGRDQAL ESGSKIVYVV SQVLFHEQVQ ALEKSGDW

Best Arabidopsis Sequence Match ( AT1G10670.1 )
(BLAST)

001: MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQINETTDL NELVEKEPWL SSEKLVVKPD MLFGKRGKSG LVALKLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEYYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FLPTGASLTP EICAPLVATL PLEIKAEIEE FIKVIFTLFQ DLDFTFLEMN
201: PFTLVDGSPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRA LGDDIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA

Arabidopsis Description

ACLA-1ATP-citrate lyase A-1 [Source:UniProtKB/TrEMBL;Acc:F4I5V8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.