Factsheet for Zm00001d018129_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010708_P001	Maize	extracellular	82.22	39.36
Zm00001d018888_P001	Maize	cytosol	73.33	37.71
Zm00001d031177_P001	Maize	cytosol	73.33	35.11
Zm00001d050894_P001	Maize	cytosol	73.33	33.17
KRG96682	Soybean	cytosol	44.44	19.14
EES09011	Sorghum	cytosol	73.33	15.6
CDY31089	Canola	plastid	35.56	15.53
Zm00001d048627_P001	Maize	extracellular, plasma membrane	75.56	15.01
Solyc01g101040.2.1	Tomato	plastid	70.0	14.89
PGSC0003DMT400047154	Potato	cytosol	70.0	14.89
Zm00001d041593_P001	Maize	extracellular, plasma membrane	68.89	14.69
Os11t0696200-01	Rice	cytosol	68.89	14.66
VIT_14s0060g00550.t01	Wine grape	cytosol	68.89	14.66
CDY32179	Canola	cytosol	68.89	14.55
GSMUA_Achr1P15970_001	Banana	mitochondrion	67.78	14.42
GSMUA_Achr11P...	Banana	cytosol	67.78	14.42
CDY31092	Canola	cytosol	67.78	14.39
Bra030777.1-P	Field mustard	cytosol	67.78	14.39
GSMUA_Achr8P06210_001	Banana	cytosol	66.67	14.18
TraesCS4D01G142600.1	Wheat	cytosol	66.67	13.99
HORVU4Hr1G028600.1	Barley	cytosol	65.56	13.98
KRH68403	Soybean	mitochondrion	65.56	13.95
TraesCS4A01G172800.1	Wheat	cytosol	66.67	13.92
TraesCS4B01G144000.2	Wheat	cytosol	66.67	13.92
AT1G09430.1	Thale cress	cytosol	65.56	13.92
Os11t0693800-01	Rice	plasma membrane	36.67	12.69
Zm00001d040984_P001	Maize	cytosol	8.89	8.16
CDY67155	Canola	cytosol	7.78	4.35
Zm00001d037566_P002	Maize	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d018129_P002	EnsemblPlants:Zm00001d018129_T002	EnsemblPlantsGene:Zm00001d018129	Gene3D:3.30.470.20	PANTHER:PTHR23118	PANTHER:PTHR23118:SF9
ProteinID:AQK75085.1	UniParc:UPI000843CEE8	UniProt:A0A1D6HKY4	MapMan:35.1	:	:

Description

ATP-citrate synthase alpha chain protein 3

Coordinates

chr5:-:214924925..214935714

Molecular Weight (calculated)

10477.8 Da

IEP (calculated)

4.728

GRAVY (calculated)

0.201

Length

90 amino acids

Sequence
(BLAST)

1: MFIIIMLHLH TDFSFLEMNP FAMVNGEPYP LDIRGELDDT TAFKNFKKWG GIEFPLPFGR VLSPTESFIH ELDEKVLISG LCFYLSFFPR

Best Arabidopsis Sequence Match ( AT1G10670.1 )
(BLAST)

001: MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQINETTDL NELVEKEPWL SSEKLVVKPD MLFGKRGKSG LVALKLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEYYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FLPTGASLTP EICAPLVATL PLEIKAEIEE FIKVIFTLFQ DLDFTFLEMN
201: PFTLVDGSPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRA LGDDIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA

Arabidopsis Description

ACLA-1ATP-citrate lyase A-1 [Source:UniProtKB/TrEMBL;Acc:F4I5V8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.