CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96682	Soybean	cytosol	47.04	95.22
VIT_14s0060g00550.t01	Wine grape	cytosol	90.31	90.31
Solyc01g101040.2.1	Tomato	plastid	90.31	90.31
PGSC0003DMT400047154	Potato	cytosol	90.31	90.31
Os11t0696200-01	Rice	cytosol	89.83	89.83
EES16175	Sorghum	cytosol	88.65	88.86
Os12t0566300-01	Rice	plastid	88.65	88.65
HORVU4Hr1G028600.1	Barley	cytosol	88.18	88.39
CDY31092	Canola	cytosol	88.42	88.21
GSMUA_Achr1P15970_001	Banana	mitochondrion	87.94	87.94
Zm00001d041593_P001	Maize	extracellular, plasma membrane	87.71	87.91
GSMUA_Achr11P...	Banana	cytosol	87.71	87.71
HORVU5Hr1G022100.2	Barley	cytosol	87.71	87.71
EES09011	Sorghum	cytosol	87.71	87.71
TraesCS5D01G097100.1	Wheat	golgi, unclear	87.47	87.47
Bra030777.1-P	Field mustard	cytosol	87.47	87.26
AT1G09430.1	Thale cress	cytosol	87.47	87.26
TraesCS5A01G084700.1	Wheat	unclear	87.23	87.23
TraesCS5B01G090600.1	Wheat	cytosol	87.23	87.23
TraesCS4D01G142600.1	Wheat	cytosol	87.71	86.48
CDY31089	Canola	plastid	42.08	86.41
GSMUA_Achr8P06210_001	Banana	cytosol	86.29	86.29
TraesCS4B01G144000.2	Wheat	cytosol	87.47	85.85
TraesCS4A01G172800.1	Wheat	cytosol	87.23	85.61
CDY32179	Canola	cytosol	84.63	84.04
Zm00001d048627_P001	Maize	extracellular, plasma membrane	87.71	81.9
KRH43605	Soybean	cytosol	81.32	81.32
KRH69592	Soybean	nucleus	80.85	80.85
KRH74568	Soybean	endoplasmic reticulum	80.38	80.38
KRH13833	Soybean	cytosol	79.91	79.91
Os11t0693800-01	Rice	plasma membrane	48.7	79.23
CDY67155	Canola	cytosol	29.08	76.4
Zm00001d018888_P001	Maize	cytosol	28.84	69.71
Zm00001d031177_P001	Maize	cytosol	30.02	67.55
Zm00001d018129_P002	Maize	extracellular	13.95	65.56
Zm00001d050894_P001	Maize	cytosol	29.79	63.32
HORVU5Hr1G013770.1	Barley	cytosol	24.11	61.82
Zm00001d010708_P001	Maize	extracellular	16.55	37.23

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
EntrezGene:100787551	Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	EMBL:ACUP02002114
InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1	InterPro:Citrate-bd	EnsemblPlantsGene:GLYMA_03G228900	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	UniProt:I1JR24	InterPro:IPR013815	InterPro:IPR016102	EnsemblPlants:KRH68403
ProteinID:KRH68403	ProteinID:KRH68403.1	PFAM:PF08442	PFAM:PF16114	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18
MetaCyc:PWY-5172	MetaCyc:PWY-5392	MetaCyc:PWY-5537	MetaCyc:PWY-5538	MetaCyc:PWY-5690	MetaCyc:PWY-5913
MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7384	SUPFAM:SSF52210	SUPFAM:SSF56059	InterPro:Succinyl-CoA_synth-like
UniParc:UPI000152A4A4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:43094593..43098417

Molecular Weight (calculated)

46688.4 Da

IEP (calculated)

5.120

GRAVY (calculated)

-0.057

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYH SKRLLKEHLK RLASIDLQIL SAQVTESTDF TELTDQHPWL SSTRLVVKPD MLFGKRGKSG LVALNLDIAQ VAEFVKARLG VEVEMGGCKA
101: PITTFIVEPF VPHDQEFYLS IVSERLGSTI SFSECGGIEI EENWDKVKTI FLPTEKPLTP EACAPLIAIL PLEIRGTIGD FIMGVFAVFK DLDFSFLEMN
201: PFTLVNEKPY PLDMRGELDD TAAFKNFNKW GNIEFPLPFG RILSPTESFI HSLDDKTSAS LKFTILNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATEDPDG RKRALLIGGG IANFTDVAAT FNGIIRALKE KESKLKAAQM HIYVRRGGPN YQTGLAKMRA LGEELGVPIQ
401: VYGPEATMTG ICKQAIDCIM SEA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.