Factsheet for Zm00001d050894_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018888_P001	Maize	cytosol	82.91	94.29
Zm00001d031177_P001	Maize	cytosol	83.42	88.3
Zm00001d018129_P002	Maize	extracellular	33.17	73.33
Os11t0693800-01	Rice	plasma membrane	51.26	39.23
Zm00001d037566_P002	Maize	plastid	15.08	38.96
Zm00001d010708_P001	Maize	extracellular	33.67	35.64
EES09011	Sorghum	cytosol	71.36	33.57
Os11t0696200-01	Rice	cytosol	68.34	32.15
Zm00001d048627_P001	Maize	extracellular, plasma membrane	72.86	32.01
HORVU4Hr1G028600.1	Barley	cytosol	66.83	31.52
TraesCS4D01G142600.1	Wheat	cytosol	67.84	31.47
TraesCS4A01G172800.1	Wheat	cytosol	67.84	31.32
TraesCS4B01G144000.2	Wheat	cytosol	67.84	31.32
GSMUA_Achr11P...	Banana	cytosol	65.33	30.73
PGSC0003DMT400047154	Potato	cytosol	65.33	30.73
Solyc01g101040.2.1	Tomato	plastid	65.33	30.73
Zm00001d041593_P001	Maize	extracellular, plasma membrane	64.82	30.57
VIT_14s0060g00550.t01	Wine grape	cytosol	64.82	30.5
GSMUA_Achr1P15970_001	Banana	mitochondrion	63.82	30.02
KRH68403	Soybean	mitochondrion	63.32	29.79
GSMUA_Achr8P06210_001	Banana	cytosol	63.32	29.79
CDY31092	Canola	cytosol	62.31	29.25
CDY32179	Canola	cytosol	62.31	29.11
Bra030777.1-P	Field mustard	cytosol	61.81	29.01
AT1G09430.1	Thale cress	cytosol	60.3	28.3
KRG96682	Soybean	cytosol	21.11	20.1
CDY31089	Canola	plastid	17.59	16.99
Zm00001d040984_P001	Maize	cytosol	7.54	15.31
CDY67155	Canola	cytosol	6.53	8.07

Protein Annotations

EnsemblPlants:Zm00001d050894_P001	EnsemblPlants:Zm00001d050894_T001	EnsemblPlantsGene:Zm00001d050894	Gene3D:3.30.470.20	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	ProteinID:AQK53209.1	SUPFAM:SSF56059	UniParc:UPI000220D285
UniProt:A0A1D6Q3S1	MapMan:5.1.1.2.1	:	:	:	:

Description

ATP-citrate synthase alpha chain protein 3

Coordinates

chr4:+:128781162..128783682

Molecular Weight (calculated)

22372.7 Da

IEP (calculated)

4.497

GRAVY (calculated)

-0.268

Length

199 amino acids

Sequence
(BLAST)

001: MLFGKPGKSG LMALNLDFDQ VKEFIKERLG IERGWATLSA SQSVGGIEIE ENWDKVKTIF LPTEKPTTSD SCAPLIATHP LEAHRKFGDF IKGVFVVFHG
101: FGKYFSFLEM NPFAMVNGEP YPLDIRGELD DTTTFKNFKK WGGIEFPLPF GRVLSPTESF IHELDEKIEI ILGKSDKFDE LMVAATDERG EVEDGEEQA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.