Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018425.1-P | Field mustard | cytosol | 94.0 | 100.0 |
| CDY40500 | Canola | cytosol | 89.11 | 94.8 |
| CDY54767 | Canola | cytosol | 89.11 | 94.8 |
| CDY70177 | Canola | cytosol | 89.11 | 94.8 |
| CDY20608 | Canola | cytosol | 91.56 | 92.58 |
| AT1G10670.3 | Thale cress | cytosol | 90.44 | 91.87 |
| KRH69592 | Soybean | nucleus | 83.56 | 88.89 |
| KRH74568 | Soybean | endoplasmic reticulum | 83.11 | 88.42 |
| PGSC0003DMT400075021 | Potato | cytosol | 76.0 | 87.24 |
| KRH13833 | Soybean | cytosol | 81.78 | 87.0 |
| PGSC0003DMT400065743 | Potato | cytosol | 81.78 | 87.0 |
| KRH43605 | Soybean | cytosol | 81.56 | 86.76 |
| PGSC0003DMT400035064 | Potato | cytosol | 81.56 | 86.76 |
| Solyc05g005160.2.1 | Tomato | unclear | 81.33 | 86.52 |
| Solyc04g039670.2.1 | Tomato | unclear | 78.44 | 83.85 |
| CDY31089 | Canola | plastid | 37.33 | 81.55 |
| CDY31092 | Canola | cytosol | 75.56 | 80.19 |
| VIT_01s0127g00260.t01 | Wine grape | plastid | 82.22 | 79.57 |
| CDY32179 | Canola | cytosol | 72.67 | 76.76 |
| CDY67155 | Canola | cytosol | 25.56 | 71.43 |
| Zm00001d037566_P002 | Maize | plastid | 6.67 | 38.96 |
Protein Annotations
| KEGG:00020+2.3.3.8 | KEGG:00020+6.2.1.5 | KEGG:00640+6.2.1.5 | KEGG:00660+6.2.1.5 | KEGG:00720+2.3.3.8 | KEGG:00720+6.2.1.5 |
| Gene3D:3.30.1490.20 | Gene3D:3.30.470.20 | Gene3D:3.40.50.261 | MapMan:5.1.1.2.1 | GO:A0A078G398 | UniProt:A0A078G398 |
| InterPro:ATP-grasp_succ-CoA_synth-type | InterPro:ATP_grasp_subdomain_1 | EnsemblPlants:CDY20965 | ProteinID:CDY20965 | ProteinID:CDY20965.1 | InterPro:Citrate-bd |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00015112001 |
| InterPro:IPR013815 | InterPro:IPR016102 | PFAM:PF08442 | PFAM:PF16114 | PANTHER:PTHR23118 | PANTHER:PTHR23118:SF9 |
| MetaCyc:PWY-5172 | MetaCyc:PWY-5392 | MetaCyc:PWY-5537 | MetaCyc:PWY-5538 | MetaCyc:PWY-5690 | MetaCyc:PWY-5913 |
| MetaCyc:PWY-6728 | MetaCyc:PWY-6969 | MetaCyc:PWY-7384 | SUPFAM:SSF52210 | SUPFAM:SSF56059 | InterPro:Succinyl-CoA_synth-like |
| UniPathway:UPA00223 | UniParc:UPI0004EE6EBB | SEG:seg | : | : | : |
Description
BnaA08g25600DBnaA08g25600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G398]
Coordinates
chrLK032115:+:104890..107233
Molecular Weight (calculated)
49971.5 Da
IEP (calculated)
5.282
GRAVY (calculated)
-0.062
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKKIREYD SKRLVKEHFK RLSGNELPIR SVQFNVLEHW FLRHEAMIIE PFSTLVLSIY INQTTDLNEL VEKEPWLSSE KLVVKPDMLF GKRGKSGLVA
101: LKLDFAEVAT FVKERLGKEV EMSGCIGPIT TFIVEPFVPH NEEFYLNVVS DRLGCSISFS ECGGIEIEEN WDKVKTIFIQ TGASLTPEVG APLVATLPLE
201: IKAEIEEFIK VIFTLFQDLD FTFLEMNPFT LVDGKPYPLD MRGELDDTAA FKNFKKWGDT EFPMPFGRVM SPTESFIHGL DEKTSASLKF TVLNPKGRIW
301: TMVAGGGASV IYADTVGDLG YASELGNYAE YSGAPKEDEV LQYARVVIDC ATANPDGKSR VLVIGGGIAN FTDVAATFNG IIRALKEKEA KLKAARMHIY
401: VRRGGPNYQK GLAKMRSLGG EIGVPIEVYG PEATMTGICK EAIQYITAAA
101: LKLDFAEVAT FVKERLGKEV EMSGCIGPIT TFIVEPFVPH NEEFYLNVVS DRLGCSISFS ECGGIEIEEN WDKVKTIFIQ TGASLTPEVG APLVATLPLE
201: IKAEIEEFIK VIFTLFQDLD FTFLEMNPFT LVDGKPYPLD MRGELDDTAA FKNFKKWGDT EFPMPFGRVM SPTESFIHGL DEKTSASLKF TVLNPKGRIW
301: TMVAGGGASV IYADTVGDLG YASELGNYAE YSGAPKEDEV LQYARVVIDC ATANPDGKSR VLVIGGGIAN FTDVAATFNG IIRALKEKEA KLKAARMHIY
401: VRRGGPNYQK GLAKMRSLGG EIGVPIEVYG PEATMTGICK EAIQYITAAA
001: MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQADDVFWL HSCFGFSDIR HHVINETTDL NELVEKEPWL SSEKLVVKPD MLFGKRGKSG LVALKLDFAD
101: VATFVKERLG KEVEMSGCKG PITTFIVEPF VPHNEEYYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FLPTGASLTP EICAPLVATL PLEIKAEIEE
201: FIKVIFTLFQ DLDFTFLEMN PFTLVDGSPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG
301: ASVIYADTVG DLGYASELGN YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN
401: YQKGLAKMRA LGDDIGVPIE VYGPEATMTG ICKEAIQYIT AAA
101: VATFVKERLG KEVEMSGCKG PITTFIVEPF VPHNEEYYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FLPTGASLTP EICAPLVATL PLEIKAEIEE
201: FIKVIFTLFQ DLDFTFLEMN PFTLVDGSPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG
301: ASVIYADTVG DLGYASELGN YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN
401: YQKGLAKMRA LGDDIGVPIE VYGPEATMTG ICKEAIQYIT AAA
Arabidopsis Description
ACLA-1ATP-citrate lyase A-1 [Source:UniProtKB/TrEMBL;Acc:F4I5V8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.