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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400075021 Potato cytosol 92.2 99.49
PGSC0003DMT400035064 Potato cytosol 95.74 95.74
Solyc04g039670.2.1 Tomato unclear 93.62 94.06
KRH69592 Soybean nucleus 90.54 90.54
KRH74568 Soybean endoplasmic reticulum 90.07 90.07
KRH43605 Soybean cytosol 88.65 88.65
CDY40500 Canola cytosol 87.94 87.94
CDY54767 Canola cytosol 87.94 87.94
CDY70177 Canola cytosol 87.94 87.94
KRH13833 Soybean cytosol 87.94 87.94
AT1G60810.2 Thale cress cytosol 87.47 87.47
Bra027127.1-P Field mustard cytosol 87.47 87.47
Bra018425.1-P Field mustard cytosol 87.0 87.0
AT1G10670.3 Thale cress cytosol 87.47 83.52
PGSC0003DMT400047154 Potato cytosol 82.98 82.98
CDY20608 Canola cytosol 86.76 82.47
CDY20965 Canola cytosol 87.0 81.78
VIT_01s0127g00260.t01 Wine grape plastid 89.83 81.72
Zm00001d037566_P002 Maize plastid 7.33 40.26
Protein Annotations
KEGG:00020+2.3.3.8KEGG:00020+6.2.1.5KEGG:00640+6.2.1.5KEGG:00660+6.2.1.5KEGG:00720+2.3.3.8KEGG:00720+6.2.1.5
EntrezGene:102595393Gene3D:3.30.1490.20Gene3D:3.30.470.20Gene3D:3.40.50.261MapMan:5.1.1.2.1InterPro:ATP-grasp_succ-CoA_synth-type
InterPro:ATP_grasp_subdomain_1InterPro:Citrate-bdGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524InterPro:IPR013815InterPro:IPR016102UniProt:M1CEI7PFAM:PF08442PFAM:PF16114
EnsemblPlantsGene:PGSC0003DMG400025587PGSC:PGSC0003DMG400025587EnsemblPlants:PGSC0003DMT400065743PANTHER:PTHR23118PANTHER:PTHR23118:SF9SUPFAM:SSF52210
SUPFAM:SSF56059InterPro:Succinyl-CoA_synth-likeUniParc:UPI00029631E3RefSeq:XP_006361663.1SEG:seg:
Description
ATP-citrate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400025587]
Coordinates
chr4:+:21539308..21543365
Molecular Weight (calculated)
46645.3 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.094
Length
423 amino acids
Sequence
(BLAST)
001: MARKKIREYD SKRLLKEHFK RLAGYDLAIK SAQITESTDL NELVEKEPWL SSTQLVVKPD MLFGKRGKSG LVALNFDLAQ VASFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSERLGCSV SFSECGGIDI EENWDKVKTI FVPTGTSFTS EICAPLVATL PLEIKGVIEE FLKVVYTLFQ DLDFTFLEMN
201: PFTLVEGKPY PLDMRGELDD TAAFKNFKKW GNVEFPLPFG RVMSATESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARIV IDCATADPDG RKRALVIGGG IANFTDVAAT CSGIIRALKE KESKLKAARM HIYVRRGGPN YQKGLAKMRS LGEEIGIPIE
401: VYGPEETMTG ICKQAIECIT AAA
Best Arabidopsis Sequence Match ( AT1G60810.2 )
(BLAST)
001: MARKKIREYD SKRLVKEHFK RLSGQELPIR SVQINQETDL NELVEREPWL SSEKLVVKPD MLFGKRGKSG LVALNLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI TIPTGASLTF EICAPLVATL PLEIKGELED FIQVIFTLFE DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSSTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA
Arabidopsis Description
ACLA-2ATP-citrate synthase alpha chain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O22718]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.