Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400075021 | Potato | cytosol | 92.2 | 99.49 |
PGSC0003DMT400035064 | Potato | cytosol | 95.74 | 95.74 |
Solyc04g039670.2.1 | Tomato | unclear | 93.62 | 94.06 |
KRH69592 | Soybean | nucleus | 90.54 | 90.54 |
KRH74568 | Soybean | endoplasmic reticulum | 90.07 | 90.07 |
KRH43605 | Soybean | cytosol | 88.65 | 88.65 |
CDY40500 | Canola | cytosol | 87.94 | 87.94 |
CDY54767 | Canola | cytosol | 87.94 | 87.94 |
CDY70177 | Canola | cytosol | 87.94 | 87.94 |
KRH13833 | Soybean | cytosol | 87.94 | 87.94 |
AT1G60810.2 | Thale cress | cytosol | 87.47 | 87.47 |
Bra027127.1-P | Field mustard | cytosol | 87.47 | 87.47 |
Bra018425.1-P | Field mustard | cytosol | 87.0 | 87.0 |
AT1G10670.3 | Thale cress | cytosol | 87.47 | 83.52 |
PGSC0003DMT400047154 | Potato | cytosol | 82.98 | 82.98 |
CDY20608 | Canola | cytosol | 86.76 | 82.47 |
CDY20965 | Canola | cytosol | 87.0 | 81.78 |
VIT_01s0127g00260.t01 | Wine grape | plastid | 89.83 | 81.72 |
Zm00001d037566_P002 | Maize | plastid | 7.33 | 40.26 |
Protein Annotations
KEGG:00020+2.3.3.8 | KEGG:00020+6.2.1.5 | KEGG:00640+6.2.1.5 | KEGG:00660+6.2.1.5 | KEGG:00720+2.3.3.8 | KEGG:00720+6.2.1.5 |
EntrezGene:102595393 | Gene3D:3.30.1490.20 | Gene3D:3.30.470.20 | Gene3D:3.40.50.261 | MapMan:5.1.1.2.1 | InterPro:ATP-grasp_succ-CoA_synth-type |
InterPro:ATP_grasp_subdomain_1 | InterPro:Citrate-bd | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005524 | InterPro:IPR013815 | InterPro:IPR016102 | UniProt:M1CEI7 | PFAM:PF08442 | PFAM:PF16114 |
EnsemblPlantsGene:PGSC0003DMG400025587 | PGSC:PGSC0003DMG400025587 | EnsemblPlants:PGSC0003DMT400065743 | PANTHER:PTHR23118 | PANTHER:PTHR23118:SF9 | SUPFAM:SSF52210 |
SUPFAM:SSF56059 | InterPro:Succinyl-CoA_synth-like | UniParc:UPI00029631E3 | RefSeq:XP_006361663.1 | SEG:seg | : |
Description
ATP-citrate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400025587]
Coordinates
chr4:+:21539308..21543365
Molecular Weight (calculated)
46645.3 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.094
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKKIREYD SKRLLKEHFK RLAGYDLAIK SAQITESTDL NELVEKEPWL SSTQLVVKPD MLFGKRGKSG LVALNFDLAQ VASFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSERLGCSV SFSECGGIDI EENWDKVKTI FVPTGTSFTS EICAPLVATL PLEIKGVIEE FLKVVYTLFQ DLDFTFLEMN
201: PFTLVEGKPY PLDMRGELDD TAAFKNFKKW GNVEFPLPFG RVMSATESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARIV IDCATADPDG RKRALVIGGG IANFTDVAAT CSGIIRALKE KESKLKAARM HIYVRRGGPN YQKGLAKMRS LGEEIGIPIE
401: VYGPEETMTG ICKQAIECIT AAA
101: PITTFIVEPF VPHNEEFYLN IVSERLGCSV SFSECGGIDI EENWDKVKTI FVPTGTSFTS EICAPLVATL PLEIKGVIEE FLKVVYTLFQ DLDFTFLEMN
201: PFTLVEGKPY PLDMRGELDD TAAFKNFKKW GNVEFPLPFG RVMSATESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARIV IDCATADPDG RKRALVIGGG IANFTDVAAT CSGIIRALKE KESKLKAARM HIYVRRGGPN YQKGLAKMRS LGEEIGIPIE
401: VYGPEETMTG ICKQAIECIT AAA
001: MARKKIREYD SKRLVKEHFK RLSGQELPIR SVQINQETDL NELVEREPWL SSEKLVVKPD MLFGKRGKSG LVALNLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI TIPTGASLTF EICAPLVATL PLEIKGELED FIQVIFTLFE DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSSTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI TIPTGASLTF EICAPLVATL PLEIKGELED FIQVIFTLFE DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSSTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA
Arabidopsis Description
ACLA-2ATP-citrate synthase alpha chain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O22718]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.