Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42418 | Canola | plastid | 94.86 | 95.06 |
| Bra008152.1-P | Field mustard | plastid | 94.65 | 94.85 |
| CDX96548 | Canola | plastid | 94.0 | 94.21 |
| CDX73093 | Canola | plastid | 93.79 | 93.99 |
| Bra015908.1-P | Field mustard | plastid | 93.36 | 93.56 |
| CDY65895 | Canola | plastid | 89.29 | 93.08 |
| KRH03484 | Soybean | plastid | 80.94 | 81.82 |
| KRH56906 | Soybean | plastid | 80.73 | 81.6 |
| Solyc03g115980.1.1 | Tomato | plastid | 80.3 | 80.82 |
| PGSC0003DMT400050234 | Potato | plastid | 80.09 | 80.6 |
| VIT_17s0000g06280.t01 | Wine grape | plastid | 80.51 | 80.51 |
| GSMUA_Achr8P24130_001 | Banana | plastid | 71.95 | 73.85 |
| Zm00001d018034_P001 | Maize | plastid | 72.16 | 73.74 |
| EES07263 | Sorghum | plastid | 71.95 | 73.52 |
| HORVU6Hr1G075900.1 | Barley | plastid | 72.38 | 73.16 |
| TraesCS6A01G307700.1 | Wheat | plastid | 72.16 | 72.94 |
| TraesCS6B01G336300.1 | Wheat | plastid | 72.16 | 72.94 |
| TraesCS6D01G286900.1 | Wheat | plastid | 72.16 | 72.94 |
| Os02t0744900-01 | Rice | plastid | 70.88 | 71.49 |
Protein Annotations
| KEGG:00900+1.3.1.83 | Gene3D:3.50.50.60 | MapMan:7.12.6.6.3 | EntrezGene:843788 | UniProt:A0A178W817 | ProteinID:AAG52372.1 |
| ProteinID:AEE35597.1 | EMBL:AK221185 | EMBL:AK317575 | ArrayExpress:AT1G74470 | EnsemblPlantsGene:AT1G74470 | RefSeq:AT1G74470 |
| TAIR:AT1G74470 | RefSeq:AT1G74470-TAIR-G | EnsemblPlants:AT1G74470.1 | TAIR:AT1G74470.1 | EMBL:AY050893 | EMBL:AY052328 |
| EMBL:AY059860 | EMBL:AY075688 | EMBL:AY091297 | EMBL:AY102144 | EMBL:BT000656 | EMBL:BT000734 |
| EMBL:BT002571 | InterPro:BchP_ChlP_pln/prok | ProteinID:CAA74372.1 | ncoils:Coil | InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010189 | GO:GO:0015979 | GO:GO:0015995 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016628 |
| GO:GO:0031969 | GO:GO:0045550 | GO:GO:0051188 | GO:GO:0055114 | GO:GO:0102067 | InterPro:Geranylgeranyl_Rdtase_fam |
| InterPro:Geranylgeranyl_Rdtase_pln/cyn | InterPro:IPR036188 | RefSeq:NP_177587.1 | ProteinID:OAP14610.1 | PFAM:PF07992 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00420 | PANTHER:PTHR42685 | PANTHER:PTHR42685:SF3 | UniProt:Q9CA67 | SUPFAM:SSF51905 |
| TIGRFAMs:TIGR02023 | TIGRFAMs:TIGR02028 | TIGRFAMs:TIGR02032 | UniParc:UPI0000048480 | SEG:seg | : |
Description
CHLPGeranylgeranyl diphosphate reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA67]
Coordinates
chr1:+:27991165..27993445
Molecular Weight (calculated)
51840.5 Da
IEP (calculated)
9.229
GRAVY (calculated)
-0.357
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTVTLKSF TGLRQSSTEQ TNFVSHVPSS LSLPQRRTSL RVTAARATPK LSNRKLRVAV IGGGPAGGAA AETLAQGGIE TILIERKMDN CKPCGGAIPL
101: CMVGEFNLPL DIIDRRVTKM KMISPSNIAV DIGRTLKEHE YIGMVRREVL DAYLRERAEK SGATVINGLF LKMDHPENWD SPYTLHYTEY DGKTGATGTK
201: KTMEVDAVIG ADGANSRVAK SIDAGDYDYA IAFQERIRIP DEKMTYYEDL AEMYVGDDVS PDFYGWVFPK CDHVAVGTGT VTHKGDIKKF QLATRNRAKD
301: KILGGKIIRV EAHPIPEHPR PRRLSKRVAL VGDAAGYVTK CSGEGIYFAA KSGRMCAEAI VEGSQNGKKM IDEGDLRKYL EKWDKTYLPT YRVLDVLQKV
401: FYRSNPAREA FVEMCNDEYV QKMTFDSYLY KRVAPGSPLE DIKLAVNTIG SLVRANALRR EIEKLSV
101: CMVGEFNLPL DIIDRRVTKM KMISPSNIAV DIGRTLKEHE YIGMVRREVL DAYLRERAEK SGATVINGLF LKMDHPENWD SPYTLHYTEY DGKTGATGTK
201: KTMEVDAVIG ADGANSRVAK SIDAGDYDYA IAFQERIRIP DEKMTYYEDL AEMYVGDDVS PDFYGWVFPK CDHVAVGTGT VTHKGDIKKF QLATRNRAKD
301: KILGGKIIRV EAHPIPEHPR PRRLSKRVAL VGDAAGYVTK CSGEGIYFAA KSGRMCAEAI VEGSQNGKKM IDEGDLRKYL EKWDKTYLPT YRVLDVLQKV
401: FYRSNPAREA FVEMCNDEYV QKMTFDSYLY KRVAPGSPLE DIKLAVNTIG SLVRANALRR EIEKLSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.