Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY67876 | Canola | plastid | 89.88 | 88.85 |
CDX74136 | Canola | plastid | 89.49 | 88.8 |
Bra001158.1-P | Field mustard | plastid | 88.33 | 87.31 |
GSMUA_Achr8P06550_001 | Banana | plastid | 60.7 | 63.67 |
Solyc10g044710.1.1 | Tomato | plastid | 59.92 | 61.85 |
KRH33866 | Soybean | plastid | 57.98 | 58.43 |
TraesCS1A01G354500.1 | Wheat | plastid | 59.53 | 57.95 |
TraesCS1B01G367300.2 | Wheat | plastid | 59.14 | 57.58 |
Zm00001d009189_P001 | Maize | plastid | 45.53 | 53.67 |
TraesCS1D01G356000.3 | Wheat | plastid | 56.42 | 48.33 |
OQU86823 | Sorghum | plastid | 56.03 | 48.32 |
PGSC0003DMT400094170 | Potato | cytosol, mitochondrion, nucleus | 28.79 | 45.12 |
Os01t0343500-01 | Rice | plastid | 17.12 | 38.26 |
VIT_14s0060g02060.t01 | Wine grape | plastid | 63.03 | 34.03 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:35.2 | EntrezGene:819729 | UniProt:A0A178VDM8 | ProteinID:AEE74268.1 | ArrayExpress:AT3G05625 |
EnsemblPlantsGene:AT3G05625 | RefSeq:AT3G05625 | TAIR:AT3G05625 | RefSeq:AT3G05625-TAIR-G | EnsemblPlants:AT3G05625.1 | TAIR:AT3G05625.1 |
EMBL:BT002435 | EMBL:BT006291 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
GO:GO:0009570 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_683531.2 | ProteinID:OAP03798.1 |
PO:PO:0000293 | PO:PO:0020030 | PFscan:PS50005 | PFscan:PS50293 | UniProt:Q8GUK5 | SUPFAM:SSF48452 |
InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00000AE201 | : | : |
Description
At3g05625 [Source:UniProtKB/TrEMBL;Acc:Q8GUK5]
Coordinates
chr3:+:1632213..1634205
Molecular Weight (calculated)
28954.2 Da
IEP (calculated)
7.455
GRAVY (calculated)
-0.355
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLTQIVNPI IYPSRTIPRR FTAISPFKTL SPQFSRHPPH ALSRRLFLPS VSSIWDAITG GGDSNPREAI AAVRRGMQLF RQGDVAGSVA EFDRAIILDP
101: RQKAYLWQRG LSLYYVDRFE EGAEQFRIDV AQNPNDTEES IWCFICEARL HGVDVARTQF LEVGRDSRPV MREAYNLFKN GGDPEKLVND FSSGQASEYF
201: YASLYAGLYY EAEGKSENAK FHLTAACGSP YGQRSDDYMA SLAKVHCLCR NWSSGIL
101: RQKAYLWQRG LSLYYVDRFE EGAEQFRIDV AQNPNDTEES IWCFICEARL HGVDVARTQF LEVGRDSRPV MREAYNLFKN GGDPEKLVND FSSGQASEYF
201: YASLYAGLYY EAEGKSENAK FHLTAACGSP YGQRSDDYMA SLAKVHCLCR NWSSGIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.