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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67876 Canola plastid 89.88 88.85
CDX74136 Canola plastid 89.49 88.8
Bra001158.1-P Field mustard plastid 88.33 87.31
GSMUA_Achr8P06550_001 Banana plastid 60.7 63.67
Solyc10g044710.1.1 Tomato plastid 59.92 61.85
KRH33866 Soybean plastid 57.98 58.43
TraesCS1A01G354500.1 Wheat plastid 59.53 57.95
TraesCS1B01G367300.2 Wheat plastid 59.14 57.58
Zm00001d009189_P001 Maize plastid 45.53 53.67
TraesCS1D01G356000.3 Wheat plastid 56.42 48.33
OQU86823 Sorghum plastid 56.03 48.32
PGSC0003DMT400094170 Potato cytosol, mitochondrion, nucleus 28.79 45.12
Os01t0343500-01 Rice plastid 17.12 38.26
VIT_14s0060g02060.t01 Wine grape plastid 63.03 34.03
Protein Annotations
Gene3D:1.25.40.10MapMan:35.2EntrezGene:819729UniProt:A0A178VDM8ProteinID:AEE74268.1ArrayExpress:AT3G05625
EnsemblPlantsGene:AT3G05625RefSeq:AT3G05625TAIR:AT3G05625RefSeq:AT3G05625-TAIR-GEnsemblPlants:AT3G05625.1TAIR:AT3G05625.1
EMBL:BT002435EMBL:BT006291GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0009507GO:GO:0009536
GO:GO:0009570InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734RefSeq:NP_683531.2ProteinID:OAP03798.1
PO:PO:0000293PO:PO:0020030PFscan:PS50005PFscan:PS50293UniProt:Q8GUK5SUPFAM:SSF48452
InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI00000AE201::
Description
At3g05625 [Source:UniProtKB/TrEMBL;Acc:Q8GUK5]
Coordinates
chr3:+:1632213..1634205
Molecular Weight (calculated)
28954.2 Da
IEP (calculated)
7.455
GRAVY (calculated)
-0.355
Length
257 amino acids
Sequence
(BLAST)
001: MSLTQIVNPI IYPSRTIPRR FTAISPFKTL SPQFSRHPPH ALSRRLFLPS VSSIWDAITG GGDSNPREAI AAVRRGMQLF RQGDVAGSVA EFDRAIILDP
101: RQKAYLWQRG LSLYYVDRFE EGAEQFRIDV AQNPNDTEES IWCFICEARL HGVDVARTQF LEVGRDSRPV MREAYNLFKN GGDPEKLVND FSSGQASEYF
201: YASLYAGLYY EAEGKSENAK FHLTAACGSP YGQRSDDYMA SLAKVHCLCR NWSSGIL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.