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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX95803 Canola plastid 77.37 78.19
Bra022262.1-P Field mustard plastid 76.32 77.13
CDX92177 Canola plastid 76.32 77.13
Solyc05g006440.2.1 Tomato plastid 52.11 50.25
KRH41862 Soybean plastid 53.68 50.0
VIT_17s0000g02160.t01 Wine grape plastid 55.26 50.0
PGSC0003DMT400058231 Potato plastid 52.11 49.75
KRH60551 Soybean plastid 53.16 49.27
GSMUA_Achr8P23940_001 Banana plastid 47.89 44.83
Os01t0805200-01 Rice plastid 48.95 44.5
Zm00001d043168_P001 Maize plastid 47.89 44.39
EES03769 Sorghum plastid 46.32 44.0
TraesCS3D01G325900.1 Wheat plastid 47.37 43.27
TraesCS3A01G332400.1 Wheat plastid 46.32 42.31
TraesCS3B01G362500.2 Wheat plastid 45.79 41.83
HORVU3Hr1G078830.2 Barley plastid 45.26 41.55
Protein Annotations
MapMan:1.1.2.9.6EntrezGene:819775UniProt:A0A178VNF6ProteinID:AEE76026.1ArrayExpress:AT3G17930EnsemblPlantsGene:AT3G17930
RefSeq:AT3G17930TAIR:AT3G17930RefSeq:AT3G17930-TAIR-GEnsemblPlants:AT3G17930.1TAIR:AT3G17930.1EMBL:AY039550
EMBL:AY093751Unigene:At.71140ncoils:CoilInterPro:DUF3007GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0009535GO:GO:0009536GO:GO:0009579
GO:GO:0009987GO:GO:0010190GO:GO:0016020GO:GO:0016021GO:GO:0016043RefSeq:NP_566593.1
ProteinID:OAP06705.1PFAM:PF11460PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR35734PANTHER:PTHR35734:SF1UniProt:Q94BY7TMHMM:TMhelix
UniParc:UPI000009CB86SEG:seg::::
Description
DAC [Source:UniProtKB/TrEMBL;Acc:A0A178VNF6]
Coordinates
chr3:-:6142125..6143310
Molecular Weight (calculated)
20914.2 Da
IEP (calculated)
7.257
GRAVY (calculated)
-0.217
Length
190 amino acids
Sequence
(BLAST)
001: MASLPFGVSN LCRNQEVLSA SVRLLPVGRQ TTGFGAAKKV LYRFEGHRLS SSVEKGEKQR MRCRVSSNST ETEDDSATKT KTTPFGYTRK DVILIGVGVT
101: ALGIGLESGL EYVGVDPLQA GNAVQLILVL GLTLGWISTY IFRVGNKEMT YAQQLRDYES QVMQKRLESL SEAELEALMA QVDEEKTKVE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.