Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES05123 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G17930.1 | EES05123 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043168_P001 | Maize | plastid | 91.5 | 89.27 |
| Os01t0805200-01 | Rice | plastid | 66.0 | 63.16 |
| TraesCS3B01G362500.2 | Wheat | plastid | 61.0 | 58.65 |
| HORVU3Hr1G078830.2 | Barley | plastid | 60.5 | 58.45 |
| TraesCS3A01G332400.1 | Wheat | plastid | 59.5 | 57.21 |
| TraesCS3D01G325900.1 | Wheat | plastid | 57.5 | 55.29 |
| GSMUA_Achr8P23940_001 | Banana | plastid | 54.0 | 53.2 |
| KRH41862 | Soybean | plastid | 51.0 | 50.0 |
| PGSC0003DMT400058231 | Potato | plastid | 49.5 | 49.75 |
| CDX92177 | Canola | plastid | 46.5 | 49.47 |
| CDX95803 | Canola | plastid | 46.5 | 49.47 |
| KRH60551 | Soybean | plastid | 50.5 | 49.27 |
| Solyc05g006440.2.1 | Tomato | plastid | 48.5 | 49.24 |
| Bra022262.1-P | Field mustard | plastid | 46.0 | 48.94 |
| VIT_17s0000g02160.t01 | Wine grape | plastid | 49.5 | 47.14 |
| AT3G17930.1 | Thale cress | plastid | 44.0 | 46.32 |
Protein Annotations
| MapMan:1.1.2.9.6 | UniProt:C5XMI5 | ncoils:Coil | InterPro:DUF3007 | EnsemblPlants:EES03769 | ProteinID:EES03769 |
| ProteinID:EES03769.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009987 | GO:GO:0010190 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | PFAM:PF11460 | PANTHER:PTHR35734 | PANTHER:PTHR35734:SF1 | EnsemblPlantsGene:SORBI_3003G328100 |
| unigene:Sbi.6495 | TMHMM:TMhelix | UniParc:UPI0001A85780 | RefSeq:XP_002458649.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:65363816..65365202
Molecular Weight (calculated)
21883.6 Da
IEP (calculated)
10.027
GRAVY (calculated)
-0.202
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAAVAAPV ASVSPGGGAV RSARRIASLH PCHSSTKIVL LPPPNGLLRS VRQRRRFAAR SSISESSTDD SQSPKQEKAP FGYTRKDVLL IGLGVTAFGV
101: GLKYGLELLG VDPLQAGNVV QLLVVLGMTV GWISTYMFRV ANKDMTYAHQ LRDYEKQVME KRLESLTEAE LQALLEQVEE EKQRMPPVPE EPNAITFKKK
101: GLKYGLELLG VDPLQAGNVV QLLVVLGMTV GWISTYMFRV ANKDMTYAHQ LRDYEKQVME KRLESLTEAE LQALLEQVEE EKQRMPPVPE EPNAITFKKK
001: MASLPFGVSN LCRNQEVLSA SVRLLPVGRQ TTGFGAAKKV LYRFEGHRLS SSVEKGEKQR MRCRVSSNST ETEDDSATKT KTTPFGYTRK DVILIGVGVT
101: ALGIGLESGL EYVGVDPLQA GNAVQLILVL GLTLGWISTY IFRVGNKEMT YAQQLRDYES QVMQKRLESL SEAELEALMA QVDEEKTKVE
101: ALGIGLESGL EYVGVDPLQA GNAVQLILVL GLTLGWISTY IFRVGNKEMT YAQQLRDYES QVMQKRLESL SEAELEALMA QVDEEKTKVE
Arabidopsis Description
DAC [Source:UniProtKB/TrEMBL;Acc:A0A178VNF6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.