Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g02160.t01 | Wine grape | plastid | 56.65 | 54.76 |
| EES03769 | Sorghum | plastid | 53.2 | 54.0 |
| Solyc05g006440.2.1 | Tomato | plastid | 51.72 | 53.3 |
| PGSC0003DMT400058231 | Potato | plastid | 52.22 | 53.27 |
| Zm00001d043168_P001 | Maize | plastid | 53.69 | 53.17 |
| KRH60551 | Soybean | plastid | 52.22 | 51.71 |
| KRH41862 | Soybean | plastid | 51.72 | 51.47 |
| Os01t0805200-01 | Rice | plastid | 52.71 | 51.2 |
| TraesCS3B01G362500.2 | Wheat | plastid | 52.22 | 50.96 |
| CDX95803 | Canola | plastid | 46.8 | 50.53 |
| TraesCS3A01G332400.1 | Wheat | plastid | 51.72 | 50.48 |
| TraesCS3D01G325900.1 | Wheat | plastid | 51.72 | 50.48 |
| Bra022262.1-P | Field mustard | plastid | 45.81 | 49.47 |
| CDX92177 | Canola | plastid | 45.81 | 49.47 |
| HORVU3Hr1G078830.2 | Barley | plastid | 50.25 | 49.28 |
| AT3G17930.1 | Thale cress | plastid | 44.83 | 47.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P23940_001 | EnsemblPlants:GSMUA_Achr8T23940_001 | EnsemblPlantsGene:GSMUA_Achr8G23940_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF3007 | ncoils:Coil | PANTHER:PTHR35734 | PANTHER:PTHR35734:SF1 | PFAM:PF11460 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000294D97E | UniProt:M0TT47 | MapMan:1.1.2.9.6 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G23940_001]
Coordinates
chr8:-:28260110..28267014
Molecular Weight (calculated)
22152.8 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.151
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVGSSVSV FNPALALVHF TAHGRLSITR SKLVSVGCQN TYGAKSVTYL KRELSRLNRR RMVSGVPRST GSSSSGGNPD DLKPSDKEEV PFGYTRKDVL
101: LIGLGVTLAG IGLKSGLEFA GVDPLQAGNV VQLFIVLGLT VGWISTYMFR VANKDMTYAQ QLRDYEKKVM EKRLEGLTEA ELEALLEQVE EEKRRLASGE
201: QIN
101: LIGLGVTLAG IGLKSGLEFA GVDPLQAGNV VQLFIVLGLT VGWISTYMFR VANKDMTYAQ QLRDYEKKVM EKRLEGLTEA ELEALLEQVE EEKRRLASGE
201: QIN
001: MASLPFGVSN LCRNQEVLSA SVRLLPVGRQ TTGFGAAKKV LYRFEGHRLS SSVEKGEKQR MRCRVSSNST ETEDDSATKT KTTPFGYTRK DVILIGVGVT
101: ALGIGLESGL EYVGVDPLQA GNAVQLILVL GLTLGWISTY IFRVGNKEMT YAQQLRDYES QVMQKRLESL SEAELEALMA QVDEEKTKVE
101: ALGIGLESGL EYVGVDPLQA GNAVQLILVL GLTLGWISTY IFRVGNKEMT YAQQLRDYES QVMQKRLESL SEAELEALMA QVDEEKTKVE
Arabidopsis Description
DAC [Source:UniProtKB/TrEMBL;Acc:A0A178VNF6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.