Factsheet for AT3G44590.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G27710.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.27	67.83
KRH26594	Soybean	endoplasmic reticulum	67.57	67.57
AT2G27720.2	Thale cress	extracellular	72.07	61.54
TraesCS1A01G277500.1	Wheat	nucleus	59.46	58.41
TraesCS1B01G286500.1	Wheat	extracellular	57.66	57.14
HORVU1Hr1G073640.1	Barley	cytosol	57.66	56.64
TraesCS1D01G276700.1	Wheat	extracellular	56.76	56.25
AT5G40040.1	Thale cress	cytosol	52.25	50.88
KRH22710	Soybean	endoplasmic reticulum	67.57	50.34
Os05t0445500-01	Rice	nucleus	60.36	48.2
AT3G28500.1	Thale cress	cytosol	49.55	47.83
KXG22113	Sorghum	endoplasmic reticulum, extracellular, plastid	55.86	42.76
Zm00001d010128_P003	Maize	cytosol	55.86	37.58

Protein Annotations

Gene3D:1.10.10.1410	MapMan:17.1.2.1.47	EntrezGene:823584	ProteinID:AEE77918.1	ProteinID:AEE77919.1	EMBL:AK228350
ArrayExpress:AT3G44590	EnsemblPlantsGene:AT3G44590	RefSeq:AT3G44590	TAIR:AT3G44590	RefSeq:AT3G44590-TAIR-G	EnsemblPlants:AT3G44590.1
TAIR:AT3G44590.1	EMBL:BT004748	ProteinID:CAB88541.1	GO:GO:0002181	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0006414	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0022626	GO:GO:0030529
InterPro:IPR038716	HAMAP:MF_01478	RefSeq:NP_190045.1	RefSeq:NP_974384.1	InterPro:P1/P2_N_sf	PFAM:PF00428
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR21141
PANTHER:PTHR21141:SF72	UniProt:Q0WRF9	UniProt:Q9LXM8	InterPro:Ribosomal_L12	SignalP:SignalP-noTM	UniParc:UPI000000C462
SEG:seg	:	:	:	:	:

Description

RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]

Coordinates

chr3:+:16163709..16164997

Molecular Weight (calculated)

11015.9 Da

IEP (calculated)

4.129

GRAVY (calculated)

-0.036

Length

111 amino acids

Sequence
(BLAST)

001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.