Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000501.1-P | Field mustard | extracellular | 88.7 | 89.47 |
| CDY31188 | Canola | extracellular | 87.83 | 88.6 |
| CDX83277 | Canola | extracellular | 87.83 | 88.6 |
| CDX71430 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 86.96 | 87.72 |
| CDY30535 | Canola | extracellular | 86.09 | 87.61 |
| CDY04508 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 86.09 | 87.61 |
| Bra034363.1-P | Field mustard | extracellular | 86.09 | 87.61 |
| CDX77131 | Canola | extracellular | 86.09 | 87.61 |
| Bra012004.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 85.22 | 86.73 |
| AT2G27720.2 | Thale cress | extracellular | 94.78 | 83.85 |
| AT3G44590.1 | Thale cress | extracellular | 67.83 | 70.27 |
| KRH26594 | Soybean | endoplasmic reticulum | 65.22 | 67.57 |
| HORVU1Hr1G073640.1 | Barley | cytosol | 58.26 | 59.29 |
| TraesCS1A01G277500.1 | Wheat | nucleus | 57.39 | 58.41 |
| TraesCS1D01G276700.1 | Wheat | extracellular | 56.52 | 58.04 |
| TraesCS1B01G286500.1 | Wheat | extracellular | 55.65 | 57.14 |
| AT5G40040.1 | Thale cress | cytosol | 56.52 | 57.02 |
| AT3G28500.1 | Thale cress | cytosol | 53.91 | 53.91 |
| KRH22710 | Soybean | endoplasmic reticulum | 66.96 | 51.68 |
| Os05t0445500-01 | Rice | nucleus | 60.0 | 49.64 |
| KXG22113 | Sorghum | endoplasmic reticulum, extracellular, plastid | 55.65 | 44.14 |
| Zm00001d010128_P003 | Maize | cytosol | 53.04 | 36.97 |
Protein Annotations
| Gene3D:1.10.10.1410 | MapMan:17.1.2.1.47 | EntrezGene:817317 | EntrezGene:823584 | ProteinID:AAC73029.1 | ProteinID:AEC08029.1 |
| ProteinID:AEC08030.1 | ProteinID:AEC08031.1 | EMBL:AF428429 | EMBL:AK317218 | ArrayExpress:AT2G27710 | EnsemblPlantsGene:AT2G27710 |
| RefSeq:AT2G27710 | TAIR:AT2G27710 | RefSeq:AT2G27710-TAIR-G | EnsemblPlants:AT2G27710.1 | TAIR:AT2G27710.1 | EMBL:AY062854 |
| EMBL:AY087501 | UniProt:B9DGN3 | EMBL:BT006518 | ncoils:Coil | GO:GO:0002181 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006412 |
| GO:GO:0006414 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 |
| GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030529 | GO:GO:0042788 | InterPro:IPR038716 | HAMAP:MF_01478 |
| RefSeq:NP_180339.1 | RefSeq:NP_850106.1 | RefSeq:NP_973549.1 | InterPro:P1/P2_N_sf | PFAM:PF00428 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF72 | UniProt:Q9SLF7 | InterPro:Ribosomal_L12 |
| SignalP:SignalP-noTM | UniParc:UPI0000000D44 | SEG:seg | : | : | : |
Description
RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
Coordinates
chr2:+:11816634..11817972
Molecular Weight (calculated)
11444.4 Da
IEP (calculated)
4.327
GRAVY (calculated)
-0.157
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG GGVAVASATS GGGGGGGASA AESKKEEKKE
101: EKEESDDDMG FSLFE
101: EKEESDDDMG FSLFE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.