Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05901 | Canola | mitochondrion, plastid | 68.37 | 76.76 |
| CDY08108 | Canola | mitochondrion | 66.98 | 74.81 |
| Bra018009.1-P | Field mustard | mitochondrion | 66.98 | 70.94 |
| VIT_06s0080g00440.t01 | Wine grape | mitochondrion | 45.35 | 54.62 |
| Solyc10g080160.1.1 | Tomato | nucleus | 48.14 | 53.77 |
| PGSC0003DMT400060895 | Potato | mitochondrion, plastid | 47.91 | 53.37 |
| KRH24085 | Soybean | mitochondrion | 47.91 | 50.12 |
| KRH29054 | Soybean | mitochondrion | 47.44 | 49.16 |
| Os07t0658200-02 | Rice | mitochondrion | 45.35 | 46.99 |
| Zm00001d022386_P001 | Maize | mitochondrion | 44.19 | 45.89 |
| EER99838 | Sorghum | mitochondrion | 43.72 | 45.63 |
| GSMUA_Achr11P... | Banana | mitochondrion | 44.19 | 44.5 |
| TraesCS2D01G133900.1 | Wheat | mitochondrion | 44.42 | 43.21 |
| TraesCS2B01G154400.1 | Wheat | mitochondrion | 44.42 | 43.02 |
| TraesCS2A01G131800.1 | Wheat | mitochondrion | 44.42 | 42.83 |
| HORVU2Hr1G023120.1 | Barley | mitochondrion | 44.19 | 42.13 |
| AT1G74970.1 | Thale cress | plastid | 15.58 | 32.21 |
Protein Annotations
| MapMan:17.7.1.2.7 | Gene3D:3.30.230.10 | EntrezGene:824070 | ProteinID:AEE78497.1 | EMBL:AK176622 | EMBL:AK176661 |
| ArrayExpress:AT3G49080 | EnsemblPlantsGene:AT3G49080 | RefSeq:AT3G49080 | TAIR:AT3G49080 | RefSeq:AT3G49080-TAIR-G | EnsemblPlants:AT3G49080.1 |
| TAIR:AT3G49080.1 | EMBL:AY140063 | Unigene:At.35650 | EMBL:BT006583 | ProteinID:CAB62001.1 | ncoils:Coil |
| GO:GO:0000462 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009559 | GO:GO:0009987 | GO:GO:0015935 |
| GO:GO:0019538 | GO:GO:0030154 | GO:GO:0030529 | GO:GO:0048229 | InterPro:IPR014721 | HAMAP:MF_00532_B |
| RefSeq:NP_190477.2 | PFAM:PF00380 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00360 | PANTHER:PTHR21569 | PANTHER:PTHR21569:SF1 |
| UniProt:Q8L6Z4 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S9 | InterPro:Ribosomal_S9_CS | InterPro:Ribosomal_S9_bac/plastid |
| SUPFAM:SSF54211 | UniParc:UPI00000AA3DF | SEG:seg | : | : | : |
Description
RPS9M30S ribosomal protein S9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z4]
Coordinates
chr3:-:18194154..18196784
Molecular Weight (calculated)
47990.4 Da
IEP (calculated)
5.398
GRAVY (calculated)
-0.769
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSRLFLRHS NLRFVTLVSS KSNSQIFSSF IRPLSTNSSG GGGNGDGNGR NRNDVPWSFT GVNDDKSGPF SSDDSFGSSG VAGSGLPGGE GKWPEEPKRW
101: NIKEEEEKVV FDTGGEVGQG IETSRERRGN EWEETKRWDM KEGEEKVVFG GGGDEVDGFG IRGEVKSNEW DVSKPWNLKE EEEGVVFDTG GEVPFSFENS
201: LEMAEEERVK KELIEKEEKE LLEVIKGPDR AFGDLIAKSG ITDEMLDSLI ALKDFQGVEG LPPLTEIENL RREKSSKKSS RAEIELQMQE DIAKARVRQV
301: DETGRAYGTG RRKCSIARVW IQPGEGKFQV NEKEFDVYFP MLDHRAALLR PLAETKTLGR WDIKCTVKGG GTTGQVGAIQ LGISRALQNW EPDMRTSLRA
401: AGFLTRDSRV VERKKPGKAK ARKSFQWVKR
101: NIKEEEEKVV FDTGGEVGQG IETSRERRGN EWEETKRWDM KEGEEKVVFG GGGDEVDGFG IRGEVKSNEW DVSKPWNLKE EEEGVVFDTG GEVPFSFENS
201: LEMAEEERVK KELIEKEEKE LLEVIKGPDR AFGDLIAKSG ITDEMLDSLI ALKDFQGVEG LPPLTEIENL RREKSSKKSS RAEIELQMQE DIAKARVRQV
301: DETGRAYGTG RRKCSIARVW IQPGEGKFQV NEKEFDVYFP MLDHRAALLR PLAETKTLGR WDIKCTVKGG GTTGQVGAIQ LGISRALQNW EPDMRTSLRA
401: AGFLTRDSRV VERKKPGKAK ARKSFQWVKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.