Factsheet for Os07t0658200-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99838	Sorghum	mitochondrion	73.01	73.54
Zm00001d022386_P001	Maize	mitochondrion	72.05	72.22
TraesCS2D01G133900.1	Wheat	mitochondrion	75.66	71.04
TraesCS2A01G131800.1	Wheat	mitochondrion	76.14	70.85
TraesCS2B01G154400.1	Wheat	mitochondrion	75.42	70.5
HORVU2Hr1G023120.1	Barley	mitochondrion	72.77	66.96
VIT_06s0080g00440.t01	Wine grape	mitochondrion	45.78	53.22
Solyc10g080160.1.1	Tomato	nucleus	48.19	51.95
PGSC0003DMT400060895	Potato	mitochondrion, plastid	48.19	51.81
GSMUA_Achr11P...	Banana	mitochondrion	51.81	50.35
CDY05901	Canola	mitochondrion, plastid	46.02	49.87
CDY08108	Canola	mitochondrion	46.02	49.61
KRH24085	Soybean	mitochondrion	46.75	47.2
Bra018009.1-P	Field mustard	mitochondrion	46.02	47.04
KRH29054	Soybean	mitochondrion	46.27	46.27
AT3G49080.1	Thale cress	mitochondrion	46.99	45.35
Os03t0769100-01	Rice	plastid	14.7	27.35

Protein Annotations

MapMan:17.7.1.2.7	Gene3D:3.30.230.10	EntrezGene:4344162	EMBL:AK100166	ProteinID:BAC81159.1	ProteinID:BAD31102.1
ProteinID:BAT03024.1	ncoils:Coil	GO:GO:0000462	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005840	GO:GO:0006139	GO:GO:0006412	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009559	GO:GO:0009987
GO:GO:0015935	GO:GO:0019538	GO:GO:0030154	GO:GO:0048229	InterPro:IPR014721	HAMAP:MF_00532_B
EnsemblPlantsGene:Os07g0658200	EnsemblPlants:Os07t0658200-02	PFAM:PF00380	ScanProsite:PS00360	PANTHER:PTHR21569	PANTHER:PTHR21569:SF1
UniProt:Q7XAM9	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9	InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid
SUPFAM:SSF54211	UniParc:UPI00001B61D6	RefSeq:XP_015646854.1	RefSeq:XP_015646855.1	SEG:seg	:

Description

Similar to 30S ribosomal protein S9. (Os07t0658200-01);Similar to 30S ribosomal protein S9. (Os07t0658200-02)

Coordinates

chr7:-:27706443..27709933

Molecular Weight (calculated)

45044.0 Da

IEP (calculated)

5.222

GRAVY (calculated)

-0.581

Length

415 amino acids

Sequence
(BLAST)

001: MLLRRLLHSS RRLGHRLQTL TPASAATAAA ASSSPVSAPL PFRRPLPASS LLWPRLLSTS GRDDDPNKPW AFTPESGDPD PFAAGEGVEA PAGEDPLGLS
101: AAGEDPWAKD FRAEGSEKGD VFEEIFKEEA ATAAVASGEK APGAGADELW TLSGEDEKDP FAEAVLGGGL EGIGGDGAAI DEADAGEDEE EEERKRLERR
201: AREQELMETL KGPNRAFGDL IEASGITEDM IASLILLKDV RGVPGLPPLR EIEDETIEKM NATSSRADVE RQKQEEIAKA RVRQVDEKGR AYGTGKRKCS
301: IARVWIQPGD GKFIVNDKQF DSYFPILDHR ADLLRPFTVT KTLGRWDVTC TVKGGGVSGQ VGAIRLGISR ALQNWEPGLR PNLKAAGYLT RDSRVVERKK
401: PGKAKARKSF QWVKR

Best Arabidopsis Sequence Match ( AT3G49080.1 )
(BLAST)

001: MLSRLFLRHS NLRFVTLVSS KSNSQIFSSF IRPLSTNSSG GGGNGDGNGR NRNDVPWSFT GVNDDKSGPF SSDDSFGSSG VAGSGLPGGE GKWPEEPKRW
101: NIKEEEEKVV FDTGGEVGQG IETSRERRGN EWEETKRWDM KEGEEKVVFG GGGDEVDGFG IRGEVKSNEW DVSKPWNLKE EEEGVVFDTG GEVPFSFENS
201: LEMAEEERVK KELIEKEEKE LLEVIKGPDR AFGDLIAKSG ITDEMLDSLI ALKDFQGVEG LPPLTEIENL RREKSSKKSS RAEIELQMQE DIAKARVRQV
301: DETGRAYGTG RRKCSIARVW IQPGEGKFQV NEKEFDVYFP MLDHRAALLR PLAETKTLGR WDIKCTVKGG GTTGQVGAIQ LGISRALQNW EPDMRTSLRA
401: AGFLTRDSRV VERKKPGKAK ARKSFQWVKR

Arabidopsis Description

RPS9M30S ribosomal protein S9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.