Factsheet for GSMUA_Achr11P24390_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0080g00440.t01	Wine grape	mitochondrion	48.01	57.42
EER99838	Sorghum	mitochondrion	50.59	52.43
Os07t0658200-02	Rice	mitochondrion	50.35	51.81
PGSC0003DMT400060895	Potato	mitochondrion, plastid	45.67	50.52
Zm00001d022386_P001	Maize	mitochondrion	48.95	50.48
Solyc10g080160.1.1	Tomato	nucleus	44.96	49.87
TraesCS2A01G131800.1	Wheat	mitochondrion	50.59	48.43
TraesCS2B01G154400.1	Wheat	mitochondrion	50.12	48.2
TraesCS2D01G133900.1	Wheat	mitochondrion	49.88	48.19
CDY05901	Canola	mitochondrion, plastid	42.62	47.52
CDY08108	Canola	mitochondrion	42.39	47.01
KRH29054	Soybean	mitochondrion	45.67	46.99
KRH24085	Soybean	mitochondrion	44.96	46.72
HORVU2Hr1G023120.1	Barley	mitochondrion	49.18	46.56
Bra018009.1-P	Field mustard	mitochondrion	42.62	44.83
AT3G49080.1	Thale cress	mitochondrion	44.5	44.19
GSMUA_Achr2P17190_001	Banana	plastid	15.93	30.77

Protein Annotations

MapMan:17.7.1.2.7	Gene3D:3.30.230.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005840
GO:GO:0006412	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555
GO:GO:0009559	GO:GO:0009987	GO:GO:0019538	GO:GO:0030154	GO:GO:0030529	GO:GO:0048229
EnsemblPlantsGene:GSMUA_Achr11G24390_001	EnsemblPlants:GSMUA_Achr11P24390_001	EnsemblPlants:GSMUA_Achr11T24390_001	InterPro:IPR014721	UniProt:M0RV19	HAMAP:MF_00532_B
PFAM:PF00380	ScanProsite:PS00360	PANTHER:PTHR21569	PANTHER:PTHR21569:SF1	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
InterPro:Ribosomal_S9	InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid	SUPFAM:SSF54211	UniParc:UPI00029604E7	SEG:seg

Description

30S ribosomal protein S9 [Source:GMGC_GENE;Acc:GSMUA_Achr11G24390_001]

Coordinates

chr11:+:23956888..23961084

Molecular Weight (calculated)

46525.9 Da

IEP (calculated)

4.966

GRAVY (calculated)

-0.468

Length

427 amino acids

Sequence
(BLAST)

001: MLARFVSHRG PFRFVALTTV ASSHVRRAPS SPPPLRPPPT FLGTLTRLAL PPSDPNSTFF PSLRSFSSNR GDDDDGDWKF TPQSDEVGSV FGEEEGDLAG
101: IADAAEGGSE VAAAGADVKS GDLWEKGIVT EGEGDIFYGI DRGFVAKEGG VREGNEEWET AEGYKPWTLG DDDEKGDLFG VVEEGEAGIE GIDGGGVEDL
201: DKARADEQKQ LEKKEEELLA ALKGPNRAFG DLIAASGITD DMIDSLILLK DVSGVKGLPP LTEIEDKAIA RLNETSTRVE IERKKQEEVA KARVRVVDEK
301: GRAYGTGRRK CSIARVWIQP GDGKFIVNEK QFDAYFSILD HRVQLLQPFI VTKTLGLWDV NCTVQGGGVS GQVGAIRLGI SRALQNWEPG LRPFLKAAGY
401: LTRDPRVVER KKPGKAKARK SFQWVKR

Best Arabidopsis Sequence Match ( AT3G49080.1 )
(BLAST)

001: MLSRLFLRHS NLRFVTLVSS KSNSQIFSSF IRPLSTNSSG GGGNGDGNGR NRNDVPWSFT GVNDDKSGPF SSDDSFGSSG VAGSGLPGGE GKWPEEPKRW
101: NIKEEEEKVV FDTGGEVGQG IETSRERRGN EWEETKRWDM KEGEEKVVFG GGGDEVDGFG IRGEVKSNEW DVSKPWNLKE EEEGVVFDTG GEVPFSFENS
201: LEMAEEERVK KELIEKEEKE LLEVIKGPDR AFGDLIAKSG ITDEMLDSLI ALKDFQGVEG LPPLTEIENL RREKSSKKSS RAEIELQMQE DIAKARVRQV
301: DETGRAYGTG RRKCSIARVW IQPGEGKFQV NEKEFDVYFP MLDHRAALLR PLAETKTLGR WDIKCTVKGG GTTGQVGAIQ LGISRALQNW EPDMRTSLRA
401: AGFLTRDSRV VERKKPGKAK ARKSFQWVKR

Arabidopsis Description

RPS9M30S ribosomal protein S9, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L6Z4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.