Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- mitochondrion 1
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73389 | Canola | cytosol | 97.1 | 97.1 |
| CDY40211 | Canola | cytosol | 96.77 | 96.77 |
| Bra007154.1-P | Field mustard | cytosol | 96.45 | 96.45 |
| KRH73434 | Soybean | cytosol | 81.29 | 81.55 |
| PGSC0003DMT400060224 | Potato | cytosol | 81.29 | 81.29 |
| VIT_13s0019g01260.t01 | Wine grape | cytosol | 81.29 | 81.29 |
| Solyc05g054490.2.1 | Tomato | nucleus | 80.97 | 80.97 |
| KRH14706 | Soybean | cytosol, mitochondrion | 80.32 | 80.58 |
| HORVU3Hr1G013790.1 | Barley | cytosol | 79.03 | 79.03 |
| TraesCSU01G049100.1 | Wheat | cytosol, golgi | 79.03 | 79.03 |
| TraesCS3A01G074900.1 | Wheat | cytosol | 78.71 | 78.71 |
| TraesCS3D01G074700.1 | Wheat | cytosol, golgi | 78.71 | 78.71 |
| Os01t0150000-02 | Rice | plasma membrane | 78.39 | 78.39 |
| GSMUA_Achr6P05060_001 | Banana | cytosol | 77.74 | 77.74 |
| GSMUA_Achr10P... | Banana | cytosol | 75.48 | 75.48 |
| Zm00001d008622_P002 | Maize | plastid | 80.0 | 59.47 |
| EES02478 | Sorghum | peroxisome, plasma membrane, plastid | 79.68 | 54.77 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | Gene3D:3.10.20.90 | MapMan:5.1.6.1.4 | EntrezGene:824702 | UniProt:A0A178VGP2 | ProteinID:AEE79372.1 |
| ArrayExpress:AT3G55360 | EnsemblPlantsGene:AT3G55360 | RefSeq:AT3G55360 | TAIR:AT3G55360 | RefSeq:AT3G55360-TAIR-G | EnsemblPlants:AT3G55360.1 |
| TAIR:AT3G55360.1 | EMBL:AY065136 | EMBL:AY081583 | EMBL:AY088452 | Unigene:At.23806 | ProteinID:CAB75894.1 |
| Symbol:CER10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006631 |
| GO:GO:0006633 | GO:GO:0006665 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009922 | GO:GO:0009923 | GO:GO:0009987 | GO:GO:0010025 | GO:GO:0010091 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016491 | GO:GO:0016627 | GO:GO:0016740 |
| GO:GO:0030154 | GO:GO:0042335 | GO:GO:0042761 | GO:GO:0055114 | GO:GO:0102758 | GO:GO:1905499 |
| InterPro:IPR001104 | RefSeq:NP_191096.1 | ProteinID:OAP04711.1 | PFAM:PF02544 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50244 |
| PANTHER:PTHR10556 | PANTHER:PTHR10556:SF28 | UniProt:Q9M2U2 | TMHMM:TMhelix | UniParc:UPI00000A3359 | SEG:seg |
Description
ECRTSC13 [Source:UniProtKB/TrEMBL;Acc:A0A178VGP2]
Coordinates
chr3:-:20520930..20523098
Molecular Weight (calculated)
35725.5 Da
IEP (calculated)
9.754
GRAVY (calculated)
0.024
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVTVVSRSG REVLKAPLDL PDSATVADLQ EAFHKRAKKF YPSRQRLTLP VTPGSKDKPV VLNSKKSLKE YCDGNNNSLT VVFKDLGAQV SYRTLFFFEY
101: LGPLLIYPVF YYFPVYKFLG YGEDCVIHPV QTYAMYYWCF HYFKRILETF FVHRFSHATS PIGNVFRNCA YYWSFGAYIA YYVNHPLYTP VSDLQMKIGF
201: GFGLVCQVAN FYCHILLKNL RDPSGAGGYQ IPRGFLFNIV TCANYTTEIY QWLGFNIATQ TIAGYVFLAV AALIMTNWAL GKHSRLRKIF DGKDGKPKYP
301: RRWVILPPFL
101: LGPLLIYPVF YYFPVYKFLG YGEDCVIHPV QTYAMYYWCF HYFKRILETF FVHRFSHATS PIGNVFRNCA YYWSFGAYIA YYVNHPLYTP VSDLQMKIGF
201: GFGLVCQVAN FYCHILLKNL RDPSGAGGYQ IPRGFLFNIV TCANYTTEIY QWLGFNIATQ TIAGYVFLAV AALIMTNWAL GKHSRLRKIF DGKDGKPKYP
301: RRWVILPPFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.