Factsheet for Os01t0150000-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G074700.1	Wheat	cytosol, golgi	90.0	90.0
HORVU3Hr1G013790.1	Barley	cytosol	90.0	90.0
TraesCSU01G049100.1	Wheat	cytosol, golgi	89.68	89.68
TraesCS3A01G074900.1	Wheat	cytosol	89.35	89.35
KRH73434	Soybean	cytosol	81.61	81.88
PGSC0003DMT400060224	Potato	cytosol	81.29	81.29
Solyc05g054490.2.1	Tomato	nucleus	81.29	81.29
KRH14706	Soybean	cytosol, mitochondrion	80.97	81.23
CDX73389	Canola	cytosol	80.0	80.0
CDY40211	Canola	cytosol	80.0	80.0
GSMUA_Achr6P05060_001	Banana	cytosol	80.0	80.0
Bra007154.1-P	Field mustard	cytosol	79.68	79.68
VIT_13s0019g01260.t01	Wine grape	cytosol	79.68	79.68
AT3G55360.1	Thale cress	cytosol, nucleus, plasma membrane	78.39	78.39
GSMUA_Achr10P...	Banana	cytosol	78.06	78.06
Zm00001d008622_P002	Maize	plastid	89.35	66.43
EES02478	Sorghum	peroxisome, plasma membrane, plastid	89.35	61.42

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	Gene3D:3.10.20.90	EntrezGene:4324516	MapMan:5.1.6.1.4	EMBL:AK060948	ProteinID:BAD61099.1
ProteinID:BAD61140.1	ProteinID:BAF03944.1	ProteinID:BAS70410.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005886
GO:GO:0006629	GO:GO:0006665	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009922	GO:GO:0009987	GO:GO:0010025	GO:GO:0010091	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016491	GO:GO:0016627	GO:GO:0016740	GO:GO:0030154
GO:GO:0042335	GO:GO:0042761	GO:GO:0055114	GO:GO:1905499	InterPro:IPR001104	EnsemblPlantsGene:Os01g0150000
EnsemblPlants:Os01t0150000-02	PFAM:PF02544	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF28	UniProt:Q5ZED1
TMHMM:TMhelix	UniParc:UPI000045045C	RefSeq:XP_015621959.1	SEG:seg	:	:

Description

eceriferum10, eceriferum 10Similar to Synaptic glycoprotein SC2. (Os01t0150000-01);3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os01t0150000-02)

Coordinates

chr1:-:2707709..2711400

Molecular Weight (calculated)

35810.7 Da

IEP (calculated)

9.866

GRAVY (calculated)

0.005

Length

310 amino acids

Sequence
(BLAST)

001: MKVSVVSRSG REVVRGGVEL KDSAKVADLQ DAIYAKTKKY YPARQRLTLP IQPGKSGKPV VLSAKASLSE YCEKGSGSLT VVFKDLGPQV FYSTLFFFEY
101: LGPLLIYPMF YYLPVYKYFG YEGERVMHPV QTYAMYYWCF HYFKRIMETF FVHRFSHATS PVSNVFRNCA YYWTFGAYIA YYCNHPLYTP VSELQMKIGF
201: GFGILCQIAN FYCHILLRNL RSPSGNGGYQ IPRGFLFNIV TCANYTTEIY QWLGFNIATQ TVAGYIFLVV AASIMTNWAL GKHRRLKKLF DGKEGRPKYP
301: RRWVILPPFL

Best Arabidopsis Sequence Match ( AT3G55360.1 )
(BLAST)

001: MKVTVVSRSG REVLKAPLDL PDSATVADLQ EAFHKRAKKF YPSRQRLTLP VTPGSKDKPV VLNSKKSLKE YCDGNNNSLT VVFKDLGAQV SYRTLFFFEY
101: LGPLLIYPVF YYFPVYKFLG YGEDCVIHPV QTYAMYYWCF HYFKRILETF FVHRFSHATS PIGNVFRNCA YYWSFGAYIA YYVNHPLYTP VSDLQMKIGF
201: GFGLVCQVAN FYCHILLKNL RDPSGAGGYQ IPRGFLFNIV TCANYTTEIY QWLGFNIATQ TIAGYVFLAV AALIMTNWAL GKHSRLRKIF DGKDGKPKYP
301: RRWVILPPFL

Arabidopsis Description

ECRTSC13 [Source:UniProtKB/TrEMBL;Acc:A0A178VGP2]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.