Factsheet for GSMUA_Achr6P05060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	89.35	89.35
VIT_13s0019g01260.t01	Wine grape	cytosol	81.94	81.94
TraesCS3D01G074700.1	Wheat	cytosol, golgi	81.61	81.61
TraesCSU01G049100.1	Wheat	cytosol, golgi	81.29	81.29
HORVU3Hr1G013790.1	Barley	cytosol	80.97	80.97
TraesCS3A01G074900.1	Wheat	cytosol	80.97	80.97
KRH73434	Soybean	cytosol	80.0	80.26
Os01t0150000-02	Rice	plasma membrane	80.0	80.0
KRH14706	Soybean	cytosol, mitochondrion	78.71	78.96
CDX73389	Canola	cytosol	78.71	78.71
CDY40211	Canola	cytosol	78.71	78.71
Bra007154.1-P	Field mustard	cytosol	78.39	78.39
AT3G55360.1	Thale cress	cytosol, nucleus, plasma membrane	77.74	77.74
Solyc05g054490.2.1	Tomato	nucleus	76.45	76.45
PGSC0003DMT400060224	Potato	cytosol	76.13	76.13
Zm00001d008622_P002	Maize	plastid	83.23	61.87
EES02478	Sorghum	peroxisome, plasma membrane, plastid	82.26	56.54

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	Gene3D:3.10.20.90	MapMan:5.1.6.1.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016627	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G05060_001	EnsemblPlants:GSMUA_Achr6P05060_001
EnsemblPlants:GSMUA_Achr6T05060_001	InterPro:IPR001104	UniProt:M0T4A4	PFAM:PF02544	PFscan:PS50244	PANTHER:PTHR10556
PANTHER:PTHR10556:SF28	TMHMM:TMhelix	UniParc:UPI000294B28E	SEG:seg	:	:

Description

Putative Trans-2,3-enoyl-CoA reductase [Source:GMGC_GENE;Acc:GSMUA_Achr6G05060_001]

Coordinates

chr6:-:3440345..3443021

Molecular Weight (calculated)

36257.3 Da

IEP (calculated)

9.823

GRAVY (calculated)

-0.017

Length

310 amino acids

Sequence
(BLAST)

001: MKVTVVSRSG REVIKGGIEL HDEATVSDLQ EAIHARTKKY YPSRQRLTLP MQAGIQGKPI VLSPKKKLVD YCDGNVKNLT VVFKDLGVQV LYRTLFFWEY
101: LGPLVIYPIF YYFPVYKYFG YEGERVVYPV QTYAMYYWCL HYSKRIMETF FVHRFSHATS PLSNVFRNCA YYWTFGAYIA YYVNHPMYTP VNDLQMKIGF
201: GFGLICQVSN FYCHILLRNL RNPNGNGGYQ IPHGFLFNIV TCANYTTEIY QWLGFNIATQ TIAGYVFLVV AALIMTNWAL AKHRRLKKLF DGKEGRPRYP
301: RRWVILPPFI

Best Arabidopsis Sequence Match ( AT3G55360.1 )
(BLAST)

001: MKVTVVSRSG REVLKAPLDL PDSATVADLQ EAFHKRAKKF YPSRQRLTLP VTPGSKDKPV VLNSKKSLKE YCDGNNNSLT VVFKDLGAQV SYRTLFFFEY
101: LGPLLIYPVF YYFPVYKFLG YGEDCVIHPV QTYAMYYWCF HYFKRILETF FVHRFSHATS PIGNVFRNCA YYWSFGAYIA YYVNHPLYTP VSDLQMKIGF
201: GFGLVCQVAN FYCHILLKNL RDPSGAGGYQ IPRGFLFNIV TCANYTTEIY QWLGFNIATQ TIAGYVFLAV AALIMTNWAL GKHSRLRKIF DGKDGKPKYP
301: RRWVILPPFL

Arabidopsis Description

ECRTSC13 [Source:UniProtKB/TrEMBL;Acc:A0A178VGP2]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.