CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14706	Soybean	cytosol, mitochondrion	97.73	97.73
VIT_13s0019g01260.t01	Wine grape	cytosol	86.73	86.45
PGSC0003DMT400060224	Potato	cytosol	83.5	83.23
Solyc05g054490.2.1	Tomato	nucleus	83.17	82.9
CDX73389	Canola	cytosol	82.52	82.26
CDY40211	Canola	cytosol	82.52	82.26
Bra007154.1-P	Field mustard	cytosol	82.2	81.94
Os01t0150000-02	Rice	plasma membrane	81.88	81.61
AT3G55360.1	Thale cress	cytosol, nucleus, plasma membrane	81.55	81.29
GSMUA_Achr6P05060_001	Banana	cytosol	80.26	80.0
TraesCS3A01G074900.1	Wheat	cytosol	79.61	79.35
TraesCSU01G049100.1	Wheat	cytosol, golgi	79.61	79.35
HORVU3Hr1G013790.1	Barley	cytosol	79.29	79.03
TraesCS3D01G074700.1	Wheat	cytosol, golgi	79.29	79.03
GSMUA_Achr10P...	Banana	cytosol	77.99	77.74
Zm00001d008622_P002	Maize	plastid	80.26	59.47
EES02478	Sorghum	peroxisome, plasma membrane, plastid	81.23	55.65

Protein Annotations

EntrezGene:100785393	InterPro:3-oxo-5_a-steroid_4-DH_C	Gene3D:3.10.20.90	MapMan:5.1.6.1.4	EMBL:ACUP02001277	EMBL:BT098368
UniProt:C6TKZ4	EnsemblPlantsGene:GLYMA_02G273300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016627	GO:GO:0042761	GO:GO:0055114	InterPro:IPR000626	InterPro:IPR001104	EnsemblPlants:KRH73434
ProteinID:KRH73434	ProteinID:KRH73434.1	ProteinID:KRH73435.1	PFAM:PF02544	PFscan:PS50053	PFscan:PS50244
PANTHER:PTHR10556	PANTHER:PTHR10556:SF28	SUPFAM:SSF54236	TMHMM:TMhelix	UniParc:UPI0001B16E59	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:45682507..45686240

Molecular Weight (calculated)

35904.7 Da

IEP (calculated)

9.838

GRAVY (calculated)

-0.041

Length

309 amino acids

Sequence
(BLAST)

001: MKVTVVSRSG REVVKGGIEL SDSATVADLQ EAIHKRTKKY PSRQRLTLPV QPGSKERPVV LNYKKSLKDY TIGNSETLTV VFKDLGPQVS YRTLFFCEYL
101: GPLLLYPVFY YLPVYQYFGY KGERVIHPVQ TYALYYWCFH YAKRILETFF VHCFSHATSP LSNVFRNCAY YWTFGSYIAY YVNHPLYTPV NDLQMKIGFG
201: FGILCQISNF YCHIILKNLR SPGGEGGYQI PRGFLFNIVT CANYTTEIYQ WLGFNIATQT VAGYIFLVVA TFIMTNWALA KHRRLKKLFD GKEGRPRYPR
301: RWVILPPFL

Best Arabidopsis Sequence Match ( AT3G55360.1 )
(BLAST)

001: MKVTVVSRSG REVLKAPLDL PDSATVADLQ EAFHKRAKKF YPSRQRLTLP VTPGSKDKPV VLNSKKSLKE YCDGNNNSLT VVFKDLGAQV SYRTLFFFEY
101: LGPLLIYPVF YYFPVYKFLG YGEDCVIHPV QTYAMYYWCF HYFKRILETF FVHRFSHATS PIGNVFRNCA YYWSFGAYIA YYVNHPLYTP VSDLQMKIGF
201: GFGLVCQVAN FYCHILLKNL RDPSGAGGYQ IPRGFLFNIV TCANYTTEIY QWLGFNIATQ TIAGYVFLAV AALIMTNWAL GKHSRLRKIF DGKDGKPKYP
301: RRWVILPPFL

Arabidopsis Description

ECRTSC13 [Source:UniProtKB/TrEMBL;Acc:A0A178VGP2]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.