Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018537.1-P | Field mustard | cytosol | 38.28 | 100.0 |
| Bra036253.1-P | Field mustard | cytosol | 96.88 | 96.88 |
| CDX90929 | Canola | cytosol | 96.88 | 96.88 |
| CDY21901 | Canola | cytosol | 96.88 | 96.88 |
| CDY22067 | Canola | cytosol | 96.88 | 96.88 |
| Bra000871.1-P | Field mustard | cytosol | 96.88 | 96.88 |
| CDY18010 | Canola | cytosol | 96.09 | 96.09 |
| CDX91295 | Canola | endoplasmic reticulum | 96.09 | 87.23 |
| Zm00001d007118_P003 | Maize | cytosol | 85.94 | 84.62 |
| VIT_05s0062g00210.t01 | Wine grape | cytosol | 85.94 | 84.62 |
| Solyc02g068450.2.1 | Tomato | cytosol, plastid | 75.0 | 84.21 |
| GSMUA_Achr1P15220_001 | Banana | cytosol | 85.16 | 83.85 |
| GSMUA_Achr1P17510_001 | Banana | cytosol | 85.16 | 83.85 |
| KRH42449 | Soybean | cytosol | 85.16 | 83.85 |
| KRH58554 | Soybean | cytosol | 85.16 | 83.85 |
| EES06054 | Sorghum | cytosol | 85.16 | 83.85 |
| EER97697 | Sorghum | cytosol | 85.16 | 83.85 |
| HORVU3Hr1G047510.1 | Barley | vacuole | 84.38 | 83.08 |
| TraesCS3A01G201100.1 | Wheat | unclear | 84.38 | 83.08 |
| TraesCS3B01G224800.1 | Wheat | cytosol | 84.38 | 83.08 |
| TraesCS3D01G204000.1 | Wheat | cytosol | 84.38 | 83.08 |
| PGSC0003DMT400024361 | Potato | cytosol | 83.59 | 82.31 |
| Os02t0824700-01 | Rice | nucleus, plasma membrane | 82.03 | 80.77 |
| Os04t0137500-00 | Rice | cytosol | 82.03 | 80.77 |
Protein Annotations
| MapMan:24.1.1.2.6 | Gene3D:3.40.50.10580 | EntrezGene:828221 | UniProt:A0A178V4M8 | ProteinID:AAC78269.1 | ProteinID:AEE82205.1 |
| ArrayExpress:AT4G02620 | EnsemblPlantsGene:AT4G02620 | RefSeq:AT4G02620 | TAIR:AT4G02620 | RefSeq:AT4G02620-TAIR-G | EnsemblPlants:AT4G02620.1 |
| TAIR:AT4G02620.1 | InterPro:ATPase_V1-cplx_f_g_su | InterPro:ATPase_V1-cplx_fsu_euk | InterPro:ATPase_V1_fsu_sf | EMBL:AY065277 | EMBL:AY084277 |
| EMBL:AY117236 | Unigene:At.48825 | ProteinID:CAB80755.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 | GO:GO:0015991 |
| GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0033180 | GO:GO:0034220 | GO:GO:0042625 |
| GO:GO:0046961 | InterPro:IPR036906 | RefSeq:NP_192171.1 | ProteinID:OAO99861.1 | PFAM:PF01990 | PIRSF:PIRSF015945 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13861 |
| PANTHER:PTHR13861:SF6 | UniProt:Q9ZQX4 | SUPFAM:SSF159468 | TIGRFAMs:TIGR01101 | UniParc:UPI00000013D8 | : |
Description
VHA-FV-type proton ATPase subunit F [Source:UniProtKB/TrEMBL;Acc:A0A178V4M8]
Coordinates
chr4:-:1149248..1151355
Molecular Weight (calculated)
14260.2 Da
IEP (calculated)
6.531
GRAVY (calculated)
0.011
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRATIPAR NSALIAMIAD EDTVVGFLMA GVGNVDIRRK TNYLIVDSKT TVRQIEDAFK EFSARDDIAI ILLSQYIANM IRFLVDSYNK PVPAILEIPS
101: KDHPYDPAHD SVLSRVKYLF SAESVSQR
101: KDHPYDPAHD SVLSRVKYLF SAESVSQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.