Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- plastid 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035247.1-P | Field mustard | plastid | 88.65 | 88.65 |
| CDX86811 | Canola | plastid | 87.94 | 87.94 |
| CDX86812 | Canola | mitochondrion, plastid | 86.52 | 86.52 |
| CDY61889 | Canola | mitochondrion, plastid | 86.52 | 86.52 |
| HORVU0Hr1G035290.1 | Barley | cytosol | 25.53 | 47.37 |
| HORVU0Hr1G037630.1 | Barley | cytosol | 25.53 | 47.37 |
| HORVU0Hr1G034480.1 | Barley | cytosol | 25.53 | 47.37 |
| HORVU0Hr1G025190.1 | Barley | cytosol | 25.53 | 47.37 |
| HORVU0Hr1G024630.1 | Barley | cytosol | 25.53 | 47.37 |
| HORVU0Hr1G026200.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU6Hr1G037250.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU5Hr1G064730.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G037950.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G037370.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G036980.1 | Barley | cytosol | 34.04 | 44.86 |
| GRMZM5G830210_P01 | Maize | plastid | 34.04 | 44.86 |
| HORVU0Hr1G033710.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G033440.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G032930.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G028370.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G026810.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU0Hr1G026270.1 | Barley | cytosol | 34.04 | 44.86 |
| HORVU3Hr1G110940.1 | Barley | cytosol | 20.57 | 43.94 |
| CAA33930 | Rice | cytosol | 33.33 | 43.93 |
| TraesCS1A01G130000.1 | Wheat | cytosol | 31.91 | 42.86 |
| AGP50789 | Barley | cytosol | 34.04 | 42.48 |
| TraesCS3A01G454200.1 | Wheat | cytosol | 33.33 | 42.34 |
| TraesCS5B01G312400.1 | Wheat | cytosol | 33.33 | 41.96 |
| TraesCS3A01G431900.1 | Wheat | cytosol | 32.62 | 41.44 |
| HORVU7Hr1G107570.1 | Barley | cytosol | 29.08 | 38.68 |
| HORVU5Hr1G070820.1 | Barley | peroxisome | 20.57 | 38.67 |
| KRH03161 | Soybean | nucleus | 37.59 | 38.41 |
| KRH56784 | Soybean | nucleus | 37.59 | 37.06 |
| PGSC0003DMT400019914 | Potato | extracellular, mitochondrion, plastid | 38.3 | 34.84 |
| Solyc12g098350.1.1 | Tomato | plastid | 36.88 | 33.33 |
Protein Annotations
| MapMan:17.7.3.2 | Gene3D:2.40.50.140 | EntrezGene:826719 | UniProt:A0A178V153 | ProteinID:AAC35543.1 | ProteinID:AEE82981.1 |
| EMBL:AK117848 | EMBL:AK221313 | ArrayExpress:AT4G11175 | EnsemblPlantsGene:AT4G11175 | RefSeq:AT4G11175 | TAIR:AT4G11175 |
| RefSeq:AT4G11175-TAIR-G | EnsemblPlants:AT4G11175.1 | TAIR:AT4G11175.1 | EMBL:BT003712 | ProteinID:CAB43052.1 | ProteinID:CAB81218.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0043022 | InterPro:IPR006196 | HAMAP:MF_00075 | InterPro:NA-bd_OB-fold |
| RefSeq:NP_192856.1 | UniProt:O82499 | ProteinID:OAO98681.1 | PFAM:PF01176 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50832 | PANTHER:PTHR33370 |
| InterPro:RNA-binding_domain_S1_IF1 | InterPro:S1_dom | SMART:SM00316 | SUPFAM:SSF50249 | InterPro:TIF_IF1 | TIGRFAMs:TIGR00008 |
| UniParc:UPI000000C11C | SEG:seg | : | : | : | : |
Description
Translation initiation factor IF-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82499]
Coordinates
chr4:+:6818058..6819253
Molecular Weight (calculated)
15734.4 Da
IEP (calculated)
10.766
GRAVY (calculated)
-0.236
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQLCSTFRP QLLLPCQFRF TNGVLIPQIN YVASNSVVNI RPMIRCQRAS GGRGGANRSK PAKPQVKEGS NKTVIEGLVT ESLPNGMFRV DLENGDNILG
101: YICGKIRKNF IRILPGDKVK VEMSVYDSTK GRIIFRMSSR D
101: YICGKIRKNF IRILPGDKVK VEMSVYDSTK GRIIFRMSSR D
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.