Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034532.1-P | Field mustard | plasma membrane | 92.49 | 92.18 |
| CDY45015 | Canola | plasma membrane | 92.49 | 92.18 |
| CDY49321 | Canola | plasma membrane | 92.15 | 91.84 |
| CDX75281 | Canola | endoplasmic reticulum | 50.51 | 87.06 |
| Bra011377.1-P | Field mustard | plasma membrane | 50.17 | 86.47 |
| KRH62026 | Soybean | plasma membrane | 72.35 | 72.6 |
| VIT_04s0008g03740.t01 | Wine grape | plasma membrane | 71.67 | 72.16 |
| KRH52686 | Soybean | cytosol, golgi, plasma membrane | 71.33 | 71.58 |
| Solyc08g068350.2.1 | Tomato | plasma membrane | 70.99 | 67.97 |
| PGSC0003DMT400028111 | Potato | plasma membrane | 71.33 | 67.64 |
| Bra037044.1-P | Field mustard | plasma membrane | 39.59 | 64.09 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plasma membrane | 62.46 | 61.0 |
| CDX72369 | Canola | plasma membrane | 55.97 | 56.16 |
| CDY13500 | Canola | golgi, plasma membrane | 29.35 | 55.13 |
| Os02t0272400-00 | Rice | mitochondrion | 56.66 | 54.79 |
| EES04915 | Sorghum | mitochondrion | 53.58 | 51.31 |
| Zm00001d053306_P001 | Maize | mitochondrion | 53.24 | 50.98 |
| TraesCS6B01G229000.1 | Wheat | cytosol, plasma membrane, vacuole | 49.15 | 50.53 |
| HORVU6Hr1G051240.4 | Barley | cytosol, plasma membrane | 45.05 | 43.42 |
Protein Annotations
| MapMan:35.2 | EntrezGene:829411 | ProteinID:AEE86113.1 | EMBL:AK175356 | EMBL:AK176417 | ArrayExpress:AT4G32750 |
| EnsemblPlantsGene:AT4G32750 | RefSeq:AT4G32750 | TAIR:AT4G32750 | RefSeq:AT4G32750-TAIR-G | EnsemblPlants:AT4G32750.1 | TAIR:AT4G32750.1 |
| EMBL:AY088074 | EMBL:BT026060 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| RefSeq:NP_567905.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR36060 |
| UniProt:Q8LA21 | TMHMM:TMhelix | UniParc:UPI00000A9F62 | SEG:seg | : | : |
Description
At4g32750 [Source:UniProtKB/TrEMBL;Acc:Q8LA21]
Coordinates
chr4:-:15795901..15798254
Molecular Weight (calculated)
33083.0 Da
IEP (calculated)
5.004
GRAVY (calculated)
0.204
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIIGDALRQ AFMPKQEYES LREEDRAWIK LQRPTLVSIV AFLCFVIFTC TIVSLKIVFP SNVLKRPFCS DIKLQPLPIY GKARDSDLFP GAFYLTDQET
101: VDYYWMVVFV PSTIIFLVSS VYLVAGIFVA YSAPHRHGFL KVVENNYCAS RRGGVRCLSI LNVVFAIIYG LLAIFLGSSL LTLGSSCSVP LFWCYEISSW
201: GLVILYAGTA FSLRRRAALT IDEGEFGNRN DQGLEMLEAN PLEFTPDVER RVNEGFKAWM GPSLLSSDEE EDEPDFYNEV PNVTHTLSSR QRS
101: VDYYWMVVFV PSTIIFLVSS VYLVAGIFVA YSAPHRHGFL KVVENNYCAS RRGGVRCLSI LNVVFAIIYG LLAIFLGSSL LTLGSSCSVP LFWCYEISSW
201: GLVILYAGTA FSLRRRAALT IDEGEFGNRN DQGLEMLEAN PLEFTPDVER RVNEGFKAWM GPSLLSSDEE EDEPDFYNEV PNVTHTLSSR QRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.