Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037032.1-P | Field mustard | cytosol | 83.71 | 84.35 |
| CDX72382 | Canola | cytosol | 83.33 | 83.97 |
| CDY13510 | Canola | cytosol | 83.33 | 83.97 |
| PGSC0003DMT400075344 | Potato | cytosol | 58.71 | 59.62 |
| Solyc12g095920.1.1 | Tomato | cytosol | 58.33 | 58.78 |
| KRH52175 | Soybean | mitochondrion | 57.95 | 54.84 |
| VIT_05s0020g04140.t01 | Wine grape | extracellular | 38.26 | 53.44 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 14.77 | 50.65 |
| EER89207 | Sorghum | cytosol | 51.89 | 48.24 |
| Os06t0150100-01 | Rice | plasma membrane | 51.52 | 47.72 |
| VIT_04s0008g00750.t01 | Wine grape | extracellular | 25.0 | 47.48 |
| Zm00001d036201_P001 | Maize | cytosol | 49.24 | 45.14 |
| TraesCS7A01G104100.1 | Wheat | plastid | 48.11 | 42.19 |
| TraesCS4A01G402500.1 | Wheat | plastid | 47.73 | 41.45 |
| TraesCS7D01G097800.1 | Wheat | plastid | 47.73 | 41.31 |
| HORVU7Hr1G021910.1 | Barley | cytosol | 47.35 | 39.31 |
| AT4G32970.1 | Thale cress | cytosol | 65.15 | 26.96 |
Protein Annotations
| MapMan:14.3.2.5 | Gene3D:3.40.50.410 | EntrezGene:829433 | ProteinID:AEE86152.1 | ArrayExpress:AT4G32960 | EnsemblPlantsGene:AT4G32960 |
| RefSeq:AT4G32960 | TAIR:AT4G32960 | RefSeq:AT4G32960-TAIR-G | EnsemblPlants:AT4G32960.1 | TAIR:AT4G32960.1 | InterPro:BABAM1 |
| EMBL:BT010907 | ProteinID:CAA21205.1 | ProteinID:CAB80013.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0045739 | GO:GO:0070531 | GO:GO:0070552 | InterPro:IPR036465 | RefSeq:NP_195022.1 |
| UniProt:O82638 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR15660 | UniParc:UPI00000A9476 | InterPro:vWFA_dom_sf | : |
Description
At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
Coordinates
chr4:-:15908572..15910292
Molecular Weight (calculated)
29425.4 Da
IEP (calculated)
7.165
GRAVY (calculated)
-0.230
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.