Factsheet for VIT_04s0008g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum	32.37	58.44
VIT_05s0020g04140.t01	Wine grape	extracellular	46.04	33.86
Solyc12g095920.1.1	Tomato	cytosol	53.24	28.24
PGSC0003DMT400075344	Potato	cytosol	52.52	28.08
CDX72382	Canola	cytosol	49.64	26.34
Bra037032.1-P	Field mustard	cytosol	48.2	25.57
CDY13510	Canola	cytosol	48.2	25.57
AT4G32960.1	Thale cress	cytosol	47.48	25.0
CDX68926	Canola	mitochondrion	22.3	24.41
KRH52175	Soybean	mitochondrion	46.76	23.3
EER89207	Sorghum	cytosol	40.29	19.72
Os06t0150100-01	Rice	plasma membrane	38.85	18.95
Zm00001d036201_P001	Maize	cytosol	37.41	18.06
HORVU7Hr1G021910.1	Barley	cytosol	38.13	16.67
TraesCS7A01G104100.1	Wheat	plastid	35.25	16.28
TraesCS4A01G402500.1	Wheat	plastid	35.25	16.12
TraesCS7D01G097800.1	Wheat	plastid	35.25	16.07
AT4G32970.1	Thale cress	cytosol	43.17	9.4

Protein Annotations

MapMan:14.3.2.5	InterPro:BABAM1	ProteinID:CBI20617	ProteinID:CBI20617.3	UniProt:D7STL8	EMBL:FN595231
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0006470	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0045739
GO:GO:0070531	GO:GO:0070552	PANTHER:PTHR15660	UniParc:UPI0001BE1AA6	ArrayExpress:VIT_04s0008g00750	EnsemblPlantsGene:VIT_04s0008g00750
EnsemblPlants:VIT_04s0008g00750.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:663837..668521

Molecular Weight (calculated)

15414.6 Da

IEP (calculated)

8.499

GRAVY (calculated)

0.163

Length

139 amino acids

Sequence
(BLAST)

001: MDSIKQAILL FVHSKLAINS DHRFAFAALG KTASWLQREF SSEVDSAIAA LRGLSVDGSC GNADLTQLFR VAAHEAKKSR AQNRIFRVLY LRVVVENGLE
101: YFFSQLVLYD LNLLQIFCSS SASMACQPET LHFGRGLSP

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.