CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075344	Potato	cytosol	60.57	65.0
Solyc12g095920.1.1	Tomato	cytosol	59.5	63.36
CDX72382	Canola	cytosol	58.06	61.83
Bra037032.1-P	Field mustard	cytosol	57.71	61.45
CDY13510	Canola	cytosol	57.71	61.45
GSMUA_Achr10P...	Banana	endoplasmic reticulum	16.13	58.44
AT4G32960.1	Thale cress	cytosol	54.84	57.95
VIT_05s0020g04140.t01	Wine grape	extracellular	36.2	53.44
EER89207	Sorghum	cytosol	53.05	52.11
Zm00001d036201_P001	Maize	cytosol	51.97	50.35
Os06t0150100-01	Rice	plasma membrane	51.25	50.18
CDX68926	Canola	mitochondrion	22.58	49.61
TraesCS7A01G104100.1	Wheat	plastid	50.54	46.84
VIT_04s0008g00750.t01	Wine grape	extracellular	23.3	46.76
TraesCS7D01G097800.1	Wheat	plastid	50.9	46.56
TraesCS4A01G402500.1	Wheat	plastid	49.82	45.72
HORVU7Hr1G021910.1	Barley	cytosol	50.18	44.03
AT4G32970.1	Thale cress	cytosol	49.82	21.79

Protein Annotations

EntrezGene:100527612	MapMan:14.3.2.5	EMBL:ACUP02003410	InterPro:BABAM1	EnsemblPlantsGene:GLYMA_06G051000	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045739	GO:GO:0070531	GO:GO:0070552
UniProt:I1K8B9	EnsemblPlants:KRH52175	ProteinID:KRH52175	ProteinID:KRH52175.1	PANTHER:PTHR15660	UniParc:UPI0001BA4594
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:3870569..3872706

Molecular Weight (calculated)

31470.9 Da

IEP (calculated)

8.139

GRAVY (calculated)

-0.319

Length

279 amino acids

Sequence
(BLAST)

001: MRLVLRRNQQ SAIRSERDME GIEGNSSRYS LKPSRICNED VLICVDVDPQ CLVEMKGATG PNGRPLTRLD SIKQAIVLFV NAKLTINPEH RFAFATLSNT
101: LVSWVRKEFS SEIESTLAAM RVLSASSSSS TTAGQPDLTH LFRLAAHEAK KSRLQGRILR VILFYCRSSE RPKHQWPVNQ KLFTLDVMYL HDKPGPDNCP
201: QEVYDTLVEA LEHVSEYEGY ILESGQGLAR VLFRHVLILL SHPQQRCIQE YVDIPKSIAK KPPQVEPMAT EDSAPISSQ

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.