CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036201_P001	Maize	cytosol	79.58	78.47
Os06t0150100-01	Rice	plasma membrane	72.18	71.93
TraesCS7A01G104100.1	Wheat	plastid	70.07	66.11
TraesCS7D01G097800.1	Wheat	plastid	70.77	65.9
TraesCS4A01G402500.1	Wheat	plastid	69.01	64.47
HORVU7Hr1G021910.1	Barley	cytosol	69.72	62.26
PGSC0003DMT400075344	Potato	cytosol	52.46	57.31
Solyc12g095920.1.1	Tomato	cytosol	52.46	56.87
CDX72382	Canola	cytosol	50.0	54.2
CDY13510	Canola	cytosol	50.0	54.2
Bra037032.1-P	Field mustard	cytosol	49.65	53.82
KRH52175	Soybean	mitochondrion	52.11	53.05
AT4G32960.1	Thale cress	cytosol	48.24	51.89
VIT_05s0020g04140.t01	Wine grape	extracellular	32.04	48.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum	12.68	46.75
CDX68926	Canola	mitochondrion	20.07	44.88
VIT_04s0008g00750.t01	Wine grape	extracellular	19.72	40.29
AT4G32970.1	Thale cress	cytosol	42.25	18.81

Protein Annotations

MapMan:14.3.2.5	EntrezGene:8071322	InterPro:BABAM1	UniProt:C5Z4A2	EnsemblPlants:EER89207	ProteinID:EER89207
ProteinID:EER89207.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045739
GO:GO:0070531	GO:GO:0070552	PANTHER:PTHR15660	EnsemblPlantsGene:SORBI_3010G039800	unigene:Sbi.20545	UniParc:UPI0001A895C0
RefSeq:XP_002437840.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:3124730..3126810

Molecular Weight (calculated)

30819.9 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.239

Length

284 amino acids

Sequence
(BLAST)

001: MATDAPPAPR YSLPPGRLPA EDILFCVDVD LEARAEMKSA AAASSGSTST ASPQPTQPAG AVGGAPAAVP RTAVRRMDAI KQALLLFVHS KLTMCPDHRF
101: AFGSLGETFS MVKKGFSSDA GSAMEAIHSL SASESRYPMA DLTQLFMTAN QEGKRAESQG RILRVVLIYC RSSTKPQHQW PVRPKNFTLD IIYLHDKPSA
201: DNCPQMVYDA LVDALDHVSQ YEGYILETGQ GLARVLFRQM CILLSHPLQR CIQDDLDIPK QVAKKTLGTE AAQNEDGTPV SSQQ

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.