Factsheet for Os06t0150100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89207	Sorghum	cytosol	71.93	72.18
Zm00001d036201_P001	Maize	cytosol	70.53	69.79
TraesCS7A01G104100.1	Wheat	plastid	69.82	66.11
TraesCS7D01G097800.1	Wheat	plastid	69.12	64.59
TraesCS4A01G402500.1	Wheat	plastid	68.07	63.82
HORVU7Hr1G021910.1	Barley	cytosol	69.12	61.95
PGSC0003DMT400075344	Potato	cytosol	51.58	56.54
Solyc12g095920.1.1	Tomato	cytosol	51.58	56.11
Bra037032.1-P	Field mustard	cytosol	50.18	54.58
CDY13510	Canola	cytosol	49.82	54.2
CDX72382	Canola	cytosol	49.47	53.82
AT4G32960.1	Thale cress	cytosol	47.72	51.52
KRH52175	Soybean	mitochondrion	50.18	51.25
GSMUA_Achr10P...	Banana	endoplasmic reticulum	13.33	49.35
VIT_05s0020g04140.t01	Wine grape	extracellular	31.23	47.09
CDX68926	Canola	mitochondrion	20.0	44.88
VIT_04s0008g00750.t01	Wine grape	extracellular	18.95	38.85
AT4G32970.1	Thale cress	cytosol	42.46	18.97

Protein Annotations

MapMan:14.3.2.5	EntrezGene:4340143	EMBL:AK068890	InterPro:BABAM1	ProteinID:BAD69045.1	ProteinID:BAF18735.1
ProteinID:BAS96180.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045739
GO:GO:0070531	GO:GO:0070552	EnsemblPlantsGene:Os06g0150100	EnsemblPlants:Os06t0150100-01	PANTHER:PTHR15660	UniProt:Q5VND0
UniParc:UPI0000458030	RefSeq:XP_015642976.1	SEG:seg	:	:	:

Description

Conserved hypothetical protein. (Os06t0150100-01)

Coordinates

chr6:-:2584171..2586156

Molecular Weight (calculated)

31189.4 Da

IEP (calculated)

7.501

GRAVY (calculated)

-0.269

Length

285 amino acids

Sequence
(BLAST)

001: MDPTPHRGGS PSPRFTLQPS RLPPEDMLFC VDVDLETRSE MRIAPGPAAA AAASPGAAGA SSGAAAASRQ AARPPVKRMD AVKQALLLFV HSKLTMCPDH
101: RFAFASLGDT VSLVKKDFSS DAGSAVEAIQ SLDASETRYA MADLTQLFKI AYQEGKRAEL QGRLLRVVLI YCRSSTKPQH QWPIKQKNFT LDIIYLHDKP
201: TADNCPQKVY DALVDALEHV SQYEGYILET GQGLARILFR QTCILLSHPL QRCIQDDLDI PKPLAKKNMV TEAAQNEDGM PVSTQ

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.