Factsheet for GSMUA_Achr10P21310_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
mitochondrion 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g00750.t01	Wine grape	extracellular	58.44	32.37
CDX68926	Canola	mitochondrion	29.87	18.11
PGSC0003DMT400075344	Potato	cytosol	58.44	17.31
Solyc12g095920.1.1	Tomato	cytosol	57.14	16.79
KRH52175	Soybean	mitochondrion	58.44	16.13
CDX72382	Canola	cytosol	51.95	15.27
Bra037032.1-P	Field mustard	cytosol	50.65	14.89
CDY13510	Canola	cytosol	50.65	14.89
AT4G32960.1	Thale cress	cytosol	50.65	14.77
VIT_05s0020g04140.t01	Wine grape	extracellular	33.77	13.76
Os06t0150100-01	Rice	plasma membrane	49.35	13.33
EER89207	Sorghum	cytosol	46.75	12.68
TraesCS7A01G104100.1	Wheat	plastid	46.75	11.96
TraesCS4A01G402500.1	Wheat	plastid	45.45	11.51
TraesCS7D01G097800.1	Wheat	plastid	45.45	11.48
Zm00001d036201_P001	Maize	cytosol	42.86	11.46
HORVU7Hr1G021910.1	Barley	cytosol	44.16	10.69
AT4G32970.1	Thale cress	cytosol	49.35	5.96

Protein Annotations

EnsemblPlants:GSMUA_Achr10P21310_001	EnsemblPlants:GSMUA_Achr10T21310_001	EnsemblPlantsGene:GSMUA_Achr10G21310_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0045739	GO:GO:0070531	GO:GO:0070552	InterPro:BABAM1	PANTHER:PTHR15660
UniParc:UPI00029652A0	UniProt:M0RK56	MapMan:14.3.2.5	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G21310_001]

Coordinates

chr10:+:26984250..26986631

Molecular Weight (calculated)

8585.2 Da

IEP (calculated)

10.601

GRAVY (calculated)

0.062

Length

77 amino acids

Sequence
(BLAST)

1: MNPDHRFAFS ILAQSVSWLR KEFSSEVDSA LSAVRAITAA DSSYGLADIT QLFRIAAHEA KKSRAQGRLF RVVNLIF

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.