CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13510	Canola	cytosol	98.09	98.09
Bra037032.1-P	Field mustard	cytosol	97.71	97.71
AT4G32960.1	Thale cress	cytosol	83.97	83.33
PGSC0003DMT400075344	Potato	cytosol	61.83	62.31
Solyc12g095920.1.1	Tomato	cytosol	61.83	61.83
CDX68926	Canola	mitochondrion	29.01	59.84
KRH52175	Soybean	mitochondrion	61.83	58.06
VIT_05s0020g04140.t01	Wine grape	extracellular	38.55	53.44
GSMUA_Achr10P...	Banana	endoplasmic reticulum	15.27	51.95
EER89207	Sorghum	cytosol	54.2	50.0
VIT_04s0008g00750.t01	Wine grape	extracellular	26.34	49.64
Os06t0150100-01	Rice	plasma membrane	53.82	49.47
Zm00001d036201_P001	Maize	cytosol	52.67	47.92
TraesCS7A01G104100.1	Wheat	plastid	52.29	45.51
TraesCS4A01G402500.1	Wheat	plastid	52.29	45.07
TraesCS7D01G097800.1	Wheat	plastid	52.29	44.92
HORVU7Hr1G021910.1	Barley	cytosol	52.67	43.4

Protein Annotations

MapMan:14.3.2.5	Gene3D:3.40.50.410	GO:A0A078C647	InterPro:BABAM1	EnsemblPlants:CDX72382	ProteinID:CDX72382
ProteinID:CDX72382.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045739
GO:GO:0070531	GO:GO:0070552	EnsemblPlantsGene:GSBRNA2T00099875001	InterPro:IPR036465	PANTHER:PTHR15660	SUPFAM:SSF53300
UniParc:UPI0004EDB1CE	InterPro:vWFA_dom_sf	:	:	:	:

Description

BnaC07g44040D

Coordinates

chrLK031796:-:953528..954748

Molecular Weight (calculated)

29064.9 Da

IEP (calculated)

7.902

GRAVY (calculated)

-0.238

Length

262 amino acids

Sequence
(BLAST)

001: MEEDRAVVIG GGASRYALKP TRINSEDILI CVDVDAESMA EMKTTGTNGR PLTRMECVKQ AIILFIHNKL SINPDHRFAF ATLSKSAAWL KKDFTSDAAS
101: AIASLRGLSA TKSSGRADLT QLFRVAAHEA KISRAQNRIL RVILIYCRSS VRPTHEWPLK QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVERVSEYEG
201: YIFESGQGLA RSVFKPMSIL LSHPQQRCAQ DDLDIPKSLA KKVPVVEAAS VDDNQIPQAM SQ

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.