Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13510 | Canola | cytosol | 98.86 | 98.86 |
| CDX72382 | Canola | cytosol | 97.71 | 97.71 |
| AT4G32960.1 | Thale cress | cytosol | 84.35 | 83.71 |
| PGSC0003DMT400075344 | Potato | cytosol | 60.69 | 61.15 |
| Solyc12g095920.1.1 | Tomato | cytosol | 60.69 | 60.69 |
| KRH52175 | Soybean | mitochondrion | 61.45 | 57.71 |
| VIT_05s0020g04140.t01 | Wine grape | extracellular | 38.93 | 53.97 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 14.89 | 50.65 |
| Os06t0150100-01 | Rice | plasma membrane | 54.58 | 50.18 |
| EER89207 | Sorghum | cytosol | 53.82 | 49.65 |
| VIT_04s0008g00750.t01 | Wine grape | extracellular | 25.57 | 48.2 |
| Zm00001d036201_P001 | Maize | cytosol | 52.67 | 47.92 |
| TraesCS7A01G104100.1 | Wheat | plastid | 52.67 | 45.85 |
| TraesCS4A01G402500.1 | Wheat | plastid | 52.67 | 45.39 |
| TraesCS7D01G097800.1 | Wheat | plastid | 52.67 | 45.25 |
| HORVU7Hr1G021910.1 | Barley | cytosol | 53.05 | 43.71 |
Protein Annotations
| MapMan:14.3.2.5 | Gene3D:3.40.50.410 | InterPro:BABAM1 | EnsemblPlantsGene:Bra037032 | EnsemblPlants:Bra037032.1 | EnsemblPlants:Bra037032.1-P |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0045739 | GO:GO:0070531 |
| GO:GO:0070552 | InterPro:IPR036465 | UniProt:M4F7H1 | PANTHER:PTHR15660 | SUPFAM:SSF53300 | UniParc:UPI0002541068 |
| InterPro:vWFA_dom_sf | : | : | : | : | : |
Description
AT4G32960 (E=6e-125) | unknown protein
Coordinates
chrA03:-:28814149..28815347
Molecular Weight (calculated)
29058.9 Da
IEP (calculated)
8.209
GRAVY (calculated)
-0.219
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: METDRAVVIG GGSTRYALKP TRINSEDILI CVDVDAESMV EMKTTGTNGR PLTRMECVKQ AIILFIHNKL SINPDHRFAF ATLSKSAAWL KKDFTSDAAS
101: AIASLRGLSA TKSSGRADLT QLFRVAAQEA KISRAQSRIL RVILIYCRSS VRPTHEWPLK QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVERVSEYEG
201: YIFESGQGLA RSVFKPMSIL LSHPQQRCAQ DDLDIPKSLA KKVPVVEAAS VDDNQIPQAM SQ
101: AIASLRGLSA TKSSGRADLT QLFRVAAQEA KISRAQSRIL RVILIYCRSS VRPTHEWPLK QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVERVSEYEG
201: YIFESGQGLA RSVFKPMSIL LSHPQQRCAQ DDLDIPKSLA KKVPVVEAAS VDDNQIPQAM SQ
001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
Arabidopsis Description
At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.