Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075344 | Potato | cytosol | 95.42 | 96.15 |
| CDX72382 | Canola | cytosol | 61.83 | 61.83 |
| CDY13510 | Canola | cytosol | 61.45 | 61.45 |
| Bra037032.1-P | Field mustard | cytosol | 60.69 | 60.69 |
| KRH52175 | Soybean | mitochondrion | 63.36 | 59.5 |
| AT4G32960.1 | Thale cress | cytosol | 58.78 | 58.33 |
| VIT_05s0020g04140.t01 | Wine grape | extracellular | 41.98 | 58.2 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 16.79 | 57.14 |
| VIT_04s0008g00750.t01 | Wine grape | extracellular | 28.24 | 53.24 |
| EER89207 | Sorghum | cytosol | 56.87 | 52.46 |
| Zm00001d036201_P001 | Maize | cytosol | 56.87 | 51.74 |
| Os06t0150100-01 | Rice | plasma membrane | 56.11 | 51.58 |
| CDX68926 | Canola | mitochondrion | 24.05 | 49.61 |
| TraesCS7A01G104100.1 | Wheat | plastid | 53.44 | 46.51 |
| TraesCS7D01G097800.1 | Wheat | plastid | 53.82 | 46.23 |
| TraesCS4A01G402500.1 | Wheat | plastid | 52.67 | 45.39 |
| HORVU7Hr1G021910.1 | Barley | cytosol | 54.96 | 45.28 |
| AT4G32970.1 | Thale cress | cytosol | 51.15 | 21.0 |
Protein Annotations
| MapMan:14.3.2.5 | Gene3D:3.40.50.410 | InterPro:BABAM1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0045739 | GO:GO:0070531 | GO:GO:0070552 | InterPro:IPR036465 | UniProt:K4DH65 |
| PANTHER:PTHR15660 | SUPFAM:SSF53300 | EnsemblPlantsGene:Solyc12g095920.1 | EnsemblPlants:Solyc12g095920.1.1 | UniParc:UPI0002769A0E | InterPro:vWFA_dom_sf |
Description
No Description!
Coordinates
chr12:-:65019222..65023428
Molecular Weight (calculated)
28704.1 Da
IEP (calculated)
6.301
GRAVY (calculated)
-0.186
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVEGQGSG PPAASGYTLQ PTRLASEDIL FCVDVDNESL VEMKVAAAGG RPYTRLDSIK QAILLFVNAK LTINPDHRFA FAALGKSASW VCKEFTSDID
101: SVVSACRGIA VDSPCGHADL TQLFRVAAHE AKKTRAQNRI LRVVLLYCRS SIPPQHQWPA TQKLFTLDVV YLHDKPGPDN CPQKVYDALV EALEHVSEYE
201: GYIFESGQGL TRVLFRHMCT LLSHPQQRCV QDDLDIPKSL TKKSATSDSA PTDENAVVVS SQ
101: SVVSACRGIA VDSPCGHADL TQLFRVAAHE AKKTRAQNRI LRVVLLYCRS SIPPQHQWPA TQKLFTLDVV YLHDKPGPDN CPQKVYDALV EALEHVSEYE
201: GYIFESGQGL TRVLFRHMCT LLSHPQQRCV QDDLDIPKSL TKKSATSDSA PTDENAVVVS SQ
001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN
Arabidopsis Description
At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.