CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037032.1-P	Field mustard	cytosol	98.86	98.86
CDX72382	Canola	cytosol	98.09	98.09
AT4G32960.1	Thale cress	cytosol	83.97	83.33
PGSC0003DMT400075344	Potato	cytosol	61.45	61.92
Solyc12g095920.1.1	Tomato	cytosol	61.45	61.45
CDX68926	Canola	mitochondrion	29.01	59.84
KRH52175	Soybean	mitochondrion	61.45	57.71
VIT_05s0020g04140.t01	Wine grape	extracellular	38.93	53.97
GSMUA_Achr10P...	Banana	endoplasmic reticulum	14.89	50.65
EER89207	Sorghum	cytosol	54.2	50.0
Os06t0150100-01	Rice	plasma membrane	54.2	49.82
VIT_04s0008g00750.t01	Wine grape	extracellular	25.57	48.2
Zm00001d036201_P001	Maize	cytosol	52.67	47.92
TraesCS7A01G104100.1	Wheat	plastid	52.29	45.51
TraesCS4A01G402500.1	Wheat	plastid	52.29	45.07
TraesCS7D01G097800.1	Wheat	plastid	52.29	44.92
HORVU7Hr1G021910.1	Barley	cytosol	52.67	43.4

Protein Annotations

MapMan:14.3.2.5	Gene3D:3.40.50.410	GO:A0A078FGD1	UniProt:A0A078FGD1	InterPro:BABAM1	EnsemblPlants:CDY13510
ProteinID:CDY13510	ProteinID:CDY13510.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006259	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0045739	GO:GO:0070531	GO:GO:0070552	EnsemblPlantsGene:GSBRNA2T00077825001	InterPro:IPR036465	PANTHER:PTHR15660
SUPFAM:SSF53300	UniParc:UPI0004EE3094	InterPro:vWFA_dom_sf	:	:	:

Description

BnaA03g52280DBnaA03g52280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGD1]

Coordinates

chrLK032035:-:775710..777110

Molecular Weight (calculated)

29015.9 Da

IEP (calculated)

8.209

GRAVY (calculated)

-0.198

Length

262 amino acids

Sequence
(BLAST)

001: METDRAVVIG GGASRYALKP TRITSEDILI CVDVDAESMV EMKTTGTNGR PLTRMECVKQ AIILFIHNKL SINPDHRFAF ATLSKSAAWL KKDFTSDAAS
101: AIASLRGLSA TKSSGRADLT QLFRVAAQEA KISRAQSRIL RVILIYCRSS VRPTHEWPLK QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVERVSEYEG
201: YIFESGQGLA RSVFKPMSIL LSHPQQRCAQ DDLDIPKSLA KKVPVVEAAS VDDNQIPQAM SQ

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.