Factsheet for Zm00001d036201_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89207	Sorghum	cytosol	78.47	79.58
Os06t0150100-01	Rice	plasma membrane	69.79	70.53
TraesCS7D01G097800.1	Wheat	plastid	70.14	66.23
TraesCS7A01G104100.1	Wheat	plastid	67.71	64.78
TraesCS4A01G402500.1	Wheat	plastid	67.71	64.14
HORVU7Hr1G021910.1	Barley	cytosol	66.32	60.06
PGSC0003DMT400075344	Potato	cytosol	51.74	57.31
Solyc12g095920.1.1	Tomato	cytosol	51.74	56.87
Bra037032.1-P	Field mustard	cytosol	47.92	52.67
CDX72382	Canola	cytosol	47.92	52.67
CDY13510	Canola	cytosol	47.92	52.67
KRH52175	Soybean	mitochondrion	50.35	51.97
AT4G32960.1	Thale cress	cytosol	45.14	49.24
VIT_05s0020g04140.t01	Wine grape	extracellular	30.56	46.56
CDX68926	Canola	mitochondrion	19.79	44.88
GSMUA_Achr10P...	Banana	endoplasmic reticulum	11.46	42.86
VIT_04s0008g00750.t01	Wine grape	extracellular	18.06	37.41
AT4G32970.1	Thale cress	cytosol	39.93	18.03

Protein Annotations

EntrezGene:100193132	MapMan:14.3.2.5	ProteinID:AQK80433.1	UniProt:B4FDX6	InterPro:BABAM1	EMBL:BT035314
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045739	GO:GO:0070531
GO:GO:0070552	PANTHER:PTHR15660	UniParc:UPI00017B6653	EnsemblPlantsGene:Zm00001d036201	EnsemblPlants:Zm00001d036201_P001	EnsemblPlants:Zm00001d036201_T001
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:76919305..76921460

Molecular Weight (calculated)

31363.8 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.148

Length

288 amino acids

Sequence
(BLAST)

001: MATDPAPVPA MRCYSLPPVR LPAEDILFCV DVDLEARAEM KSAAAAAASS GSTSTASPQP TQPAGAGGAP AAGPRTVVRR MDAVRQALLL FVHSKLTMCP
101: EHRFAFASLG ETFSMVKKGF SSDAGFAMEA IHSLSASETR YAMADLTQLF MTACQEGKRA ESQGRILRVV LIYCRSSTKP QHQWPVKPKN FTLDIIYLHD
201: KPNPDNCPQK VYDALVDVLE HVSQYEGYIL ETGQGLARVL FRQMCILVSH PLQRCMQDDL DIPKQVAKKI VAAEPAQNED AAPVSSQQ

Best Arabidopsis Sequence Match ( AT4G32960.1 )
(BLAST)

001: MEEERVAVTG VGTTRYALKP GRIKSEDILI CIDVDAESMV EMKTTGTNGR PLIRMECVKQ AIILFIHNKL SINPDHRFAF ATLAKSAAWL KKEFTSDAES
101: AVASLRGLSG NKSSSRADLT LLFRAAAQEA KVSRAQNRIF RVILIYCRSS MRPTHEWPLN QKLFTLDVMY LHDKPSPDNC PQDVYDSLVD AVEHVSEYEG
201: YIFESGQGLA RSVFKPMSML LTHPQQRCAQ DDLDIPMSLA KKVPVTEAAS AVDPHNGNNI QIIN

Arabidopsis Description

At4g32960 [Source:UniProtKB/TrEMBL;Acc:O82638]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.