Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G45490.1 | Thale cress | cytosol | 66.76 | 65.25 |
| CDY26370 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 42.2 | 59.84 |
| Bra021980.1-P | Field mustard | cytosol, nucleus, plasma membrane | 61.85 | 56.91 |
| CDY65474 | Canola | cytosol | 59.83 | 55.35 |
| AT4G19060.1 | Thale cress | cytosol | 43.64 | 39.43 |
| GSMUA_Achr1P08690_001 | Banana | mitochondrion | 13.87 | 26.82 |
| GSMUA_Achr1P08716_001 | Banana | cytosol | 25.72 | 22.08 |
| Os01t0798900-00 | Rice | cytosol | 24.28 | 21.16 |
| TraesCS3B01G358800.1 | Wheat | extracellular | 23.7 | 20.97 |
| TraesCS3D01G322300.1 | Wheat | cytosol | 23.7 | 20.97 |
| EES01602 | Sorghum | cytosol | 24.86 | 20.87 |
| Zm00001d043199_P001 | Maize | cytosol | 23.99 | 20.19 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:834580 | ProteinID:AED95252.1 | EMBL:AK227575 | ArrayExpress:AT5G45440 |
| EnsemblPlantsGene:AT5G45440 | RefSeq:AT5G45440 | TAIR:AT5G45440 | RefSeq:AT5G45440-TAIR-G | EnsemblPlants:AT5G45440.1 | TAIR:AT5G45440.1 |
| ProteinID:BAB09172.1 | EMBL:BT006374 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0043531 | InterPro:NB-ARC | RefSeq:NP_199357.1 |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PANTHER:PTHR23155 | UniProt:Q0WTI0 | UniProt:Q9FHJ2 | SUPFAM:SSF52540 |
| UniParc:UPI000009D1C3 | : | : | : | : | : |
Description
Probable disease resistance protein At5g45440 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHJ2]
Coordinates
chr5:-:18412059..18413617
Molecular Weight (calculated)
39448.3 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.732
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQEDSSRGL TSVGRVDFTN RFADRYNEWL GTTGDETKQV EDRVETDSGL PGHDIYGFEN EIKSLQHFLL DQKSYKLFKS LVVVGEYGVG KTALCQQIFN
101: DYDVRNAYAP RIWVSMHSNE SKEGLDGKIC VLKTILKGLG VEESMFESIH REVVEEVSNR QEAGEIDGET AKEKEISALL YALHLNLRWK KYLIVFDDVQ
201: EIDNWDEKLD AKLNEGEKWG KYLSDGFPKG SGGRVIYTTR DENLAKNLVV QKHEIHRLWP LSDSNSVWKI YEAMIQKREK ESPRNDKKCI DELMNKSRGL
301: PLAARLLAEL DPMLFDDGKA NQNGSKDGKT DSVDNPNSEE SKTKPL
101: DYDVRNAYAP RIWVSMHSNE SKEGLDGKIC VLKTILKGLG VEESMFESIH REVVEEVSNR QEAGEIDGET AKEKEISALL YALHLNLRWK KYLIVFDDVQ
201: EIDNWDEKLD AKLNEGEKWG KYLSDGFPKG SGGRVIYTTR DENLAKNLVV QKHEIHRLWP LSDSNSVWKI YEAMIQKREK ESPRNDKKCI DELMNKSRGL
301: PLAARLLAEL DPMLFDDGKA NQNGSKDGKT DSVDNPNSEE SKTKPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.