Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G45440.1 | Thale cress | cytosol | 65.25 | 66.76 |
| CDY26370 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 42.37 | 61.48 |
| Bra021980.1-P | Field mustard | cytosol, nucleus, plasma membrane | 61.58 | 57.98 |
| CDY65474 | Canola | cytosol | 60.45 | 57.22 |
| AT4G19060.1 | Thale cress | cytosol | 43.79 | 40.47 |
| GSMUA_Achr1P08690_001 | Banana | mitochondrion | 13.56 | 26.82 |
| GSMUA_Achr1P08716_001 | Banana | cytosol | 24.86 | 21.84 |
| Os01t0798900-00 | Rice | cytosol | 23.73 | 21.16 |
| Zm00001d043199_P001 | Maize | cytosol | 24.01 | 20.68 |
| TraesCS3B01G358800.1 | Wheat | extracellular | 22.6 | 20.46 |
| TraesCS3D01G322300.1 | Wheat | cytosol | 22.6 | 20.46 |
| EES01602 | Sorghum | cytosol | 23.73 | 20.39 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:834585 | ProteinID:AED95258.1 | ProteinID:AED95259.1 | ArrayExpress:AT5G45490 |
| EnsemblPlantsGene:AT5G45490 | RefSeq:AT5G45490 | TAIR:AT5G45490 | RefSeq:AT5G45490-TAIR-G | EnsemblPlants:AT5G45490.1 | TAIR:AT5G45490.1 |
| EMBL:AY065019 | EMBL:AY090327 | ProteinID:BAB09177.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0043531 |
| InterPro:NB-ARC | RefSeq:NP_001078718.1 | RefSeq:NP_199362.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PO:PO:0000293 |
| PANTHER:PTHR23155 | UniProt:Q9FHI7 | SUPFAM:SSF52540 | UniParc:UPI00000A2080 | SEG:seg | : |
Description
Probable disease resistance protein At5g45490 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHI7]
Coordinates
chr5:+:18430717..18432430
Molecular Weight (calculated)
40427.7 Da
IEP (calculated)
5.561
GRAVY (calculated)
-0.780
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSKNLQQAV LTNEFTTNFI TTCKDWLDVN GLAKGNLEKK RDDNEEEERL KTESKLPGHD IHGFDNEIKS LQHFLLDQKV RREFKSLVIV GEYGVGKTAL
101: CQKIFNDEAV KSVYAPRVWV SMENKESKEG LDGKICVLKK ILKGLGVEEL ILETISTDAK QEFKDNEEVA SNQEAGEIDR ETEKEKELSA LLYALHLNLR
201: WKKYLIVFDD VRENDNWDEK LDAKLKEDEK WGKYLSDGFP KGSGGRVIYT TRDENLAKNL VAQKHEIHRL WPLSDHQSVW KIYDAVVKDK QKESPRNDKK
301: CIDELMNKSR GLPLAARLLA ERDPVFVDDE VGPVGSTHGQ TDSSNRQPAN QASS
101: CQKIFNDEAV KSVYAPRVWV SMENKESKEG LDGKICVLKK ILKGLGVEEL ILETISTDAK QEFKDNEEVA SNQEAGEIDR ETEKEKELSA LLYALHLNLR
201: WKKYLIVFDD VRENDNWDEK LDAKLKEDEK WGKYLSDGFP KGSGGRVIYT TRDENLAKNL VAQKHEIHRL WPLSDHQSVW KIYDAVVKDK QKESPRNDKK
301: CIDELMNKSR GLPLAARLLA ERDPVFVDDE VGPVGSTHGQ TDSSNRQPAN QASS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.