Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31531 | Canola | plastid | 99.28 | 92.98 |
| AT5G60600.1 | Thale cress | plastid | 96.83 | 90.69 |
| KRH26422 | Soybean | nucleus, plastid | 87.9 | 82.32 |
| VIT_06s0004g02900.t01 | Wine grape | plastid | 87.75 | 82.3 |
| KRH22900 | Soybean | nucleus | 87.61 | 81.94 |
| PGSC0003DMT400020795 | Potato | cytosol, plastid | 85.73 | 80.41 |
| GSMUA_Achr1P08940_001 | Banana | plastid | 86.17 | 80.27 |
| Solyc11g069380.1.1 | Tomato | plastid | 85.45 | 80.14 |
| EES07113 | Sorghum | plastid | 84.44 | 78.55 |
| Os02t0603800-01 | Rice | plastid | 84.01 | 78.36 |
| Zm00001d017139_P003 | Maize | plastid | 84.87 | 78.32 |
| TraesCS6A01G215500.1 | Wheat | plastid | 83.72 | 78.09 |
| HORVU6Hr1G054940.1 | Barley | plastid | 83.57 | 77.96 |
| TraesCS6D01G197800.1 | Wheat | plastid | 83.57 | 77.96 |
| TraesCS6B01G245100.1 | Wheat | plastid | 83.29 | 77.69 |
Protein Annotations
| KEGG:00900+1.17.7.3 | Gene3D:3.20.20.20 | Gene3D:3.30.413.10 | MapMan:9.1.2.7 | EnsemblPlantsGene:Bra002468 | EnsemblPlants:Bra002468.1 |
| EnsemblPlants:Bra002468.1-P | InterPro:Dihydropteroate_synth-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008299 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 |
| GO:GO:0009719 | GO:GO:0009862 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0044237 |
| GO:GO:0046429 | GO:GO:0051539 | GO:GO:0055114 | InterPro:IPR011005 | InterPro:IspG_atypical | InterPro:IspG_bac-typ |
| UniProt:M4CE37 | HAMAP:MF_00159 | PFAM:PF04551 | PIRSF:PIRSF037336 | PANTHER:PTHR30454 | SUPFAM:SSF56014 |
| TIGRFAMs:TIGR00612 | UniParc:UPI00025440E1 | SEG:seg | : | : | : |
Description
AT5G60600 (E=0.0) GCPE, ISPG, CSB3, CLB4, HDS | HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE); 4 iron, 4 sulfur cluster binding / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Coordinates
chrA10:+:9347596..9351356
Molecular Weight (calculated)
77087.9 Da
IEP (calculated)
5.726
GRAVY (calculated)
-0.176
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGVLPAPF SGVKISDSKL GFVPRQKYCE SLHKTVRRKT RTVMVGDVAL GSEHPIRIQT MTTSDTKDIA ATVDEVMRIA DKGADIVRIT VQGKKEADAC
101: FEIKDKLVQL NYNIPLVADI HFAPAVALRV AECFDKIRVN PGNFADRRAQ FETIEYTEDE YQKELQHIEQ VFTPLVEKCK KYGRAMRIGT NHGSLSDRIM
201: SYYGDSPRGM VESAFEFARI CRKLDYHNFV FSMKASNPVI MVQAYRLLVA EMYVHGWDYP LHLGVTEAGE GEDGRMKSAI GIGTLLQDGL GDTIRVSLTE
301: PPEEEIDPCK RLANLGTKAA ELQQGVAPFE EKHRHYFDFQ RRTGDLPVQK EGEEVDYRNV LHRDGSVLMT VSLDQLKAPE LLYRSLATKL VVGMPFKDLA
401: TVDSILLREL PPVDDHVARL ALKRLIDVSM GVIAPLSEQL TKPLPNAMVL VNLKELSGGA YKLLPEGTRL VVSVRGDEPY EELEVLKSID ATMILHDVPF
501: NEDNVSRVHA ARRLFEFLSE NSVNFPVIHH INFPTGIHRD ELVIHAGTYA GALLVDGLGD GVMLEAPDQD FEFLRNTSFN LLQGCRMRNT KTEYVSCPSC
601: GRTLFDLQEI SAEIREKTSH LPGVSIAIMG CIVNGPGEMA DADFGYVGGS PGKIDLYVGK TVVKRGIAMS EATDALIGLI KEHGRWVDPP VADE
101: FEIKDKLVQL NYNIPLVADI HFAPAVALRV AECFDKIRVN PGNFADRRAQ FETIEYTEDE YQKELQHIEQ VFTPLVEKCK KYGRAMRIGT NHGSLSDRIM
201: SYYGDSPRGM VESAFEFARI CRKLDYHNFV FSMKASNPVI MVQAYRLLVA EMYVHGWDYP LHLGVTEAGE GEDGRMKSAI GIGTLLQDGL GDTIRVSLTE
301: PPEEEIDPCK RLANLGTKAA ELQQGVAPFE EKHRHYFDFQ RRTGDLPVQK EGEEVDYRNV LHRDGSVLMT VSLDQLKAPE LLYRSLATKL VVGMPFKDLA
401: TVDSILLREL PPVDDHVARL ALKRLIDVSM GVIAPLSEQL TKPLPNAMVL VNLKELSGGA YKLLPEGTRL VVSVRGDEPY EELEVLKSID ATMILHDVPF
501: NEDNVSRVHA ARRLFEFLSE NSVNFPVIHH INFPTGIHRD ELVIHAGTYA GALLVDGLGD GVMLEAPDQD FEFLRNTSFN LLQGCRMRNT KTEYVSCPSC
601: GRTLFDLQEI SAEIREKTSH LPGVSIAIMG CIVNGPGEMA DADFGYVGGS PGKIDLYVGK TVVKRGIAMS EATDALIGLI KEHGRWVDPP VADE
001: MATGVLPAPV SGIKIPDSKV GFGKSMNLVR ICDVRSLRSA RRRVSVIRNS NQGSDLAELQ PASEGSPLLV PRQKYCESLH KTVRRKTRTV MVGNVALGSE
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
Arabidopsis Description
ISPG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4K0E8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.