Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002468.1-P | Field mustard | plastid | 90.69 | 96.83 |
| CDY31531 | Canola | plastid | 96.76 | 96.76 |
| CDY53637 | Canola | plastid | 95.68 | 96.33 |
| KRH26422 | Soybean | nucleus, plastid | 86.37 | 86.37 |
| VIT_06s0004g02900.t01 | Wine grape | plastid | 85.83 | 85.95 |
| CDY53636 | Canola | cytosol | 21.19 | 85.79 |
| KRH22900 | Soybean | nucleus | 85.69 | 85.58 |
| PGSC0003DMT400020795 | Potato | cytosol, plastid | 83.54 | 83.65 |
| Solyc11g069380.1.1 | Tomato | plastid | 83.54 | 83.65 |
| GSMUA_Achr1P08940_001 | Banana | plastid | 83.27 | 82.82 |
| Os02t0603800-01 | Rice | plastid | 81.51 | 81.18 |
| EES07113 | Sorghum | plastid | 81.65 | 81.1 |
| Zm00001d017139_P003 | Maize | plastid | 82.05 | 80.85 |
| HORVU6Hr1G054940.1 | Barley | plastid | 81.11 | 80.78 |
| TraesCS6A01G215500.1 | Wheat | plastid | 80.84 | 80.51 |
| TraesCS6D01G197800.1 | Wheat | plastid | 80.7 | 80.38 |
| TraesCS6B01G245100.1 | Wheat | plastid | 80.57 | 80.24 |
Protein Annotations
| KEGG:00900+1.17.7.3 | Gene3D:3.20.20.20 | Gene3D:3.30.413.10 | EntrezGene:836181 | MapMan:9.1.2.7 | UniProt:A0A178UN53 |
| ProteinID:AED97353.1 | ProteinID:AED97354.1 | EMBL:AF434673 | ArrayExpress:AT5G60600 | EnsemblPlantsGene:AT5G60600 | RefSeq:AT5G60600 |
| TAIR:AT5G60600 | RefSeq:AT5G60600-TAIR-G | EnsemblPlants:AT5G60600.1 | TAIR:AT5G60600.1 | EMBL:AY081261 | EMBL:AY094472 |
| Unigene:At.21376 | ProteinID:BAB09833.1 | EMBL:BT010473 | ncoils:Coil | InterPro:Dihydropteroate_synth-like | UniProt:F4K0E8 |
| Symbol:GCPE | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008299 | GO:GO:0009058 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 | GO:GO:0009719 |
| GO:GO:0009862 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0016491 | GO:GO:0019288 |
| GO:GO:0044237 | GO:GO:0046429 | GO:GO:0046872 | GO:GO:0051536 | GO:GO:0051539 | GO:GO:0055114 |
| InterPro:IPR011005 | InterPro:IspG_atypical | InterPro:IspG_bac-typ | HAMAP:MF_00159 | RefSeq:NP_200868.2 | RefSeq:NP_851233.1 |
| ProteinID:OAO95289.1 | PFAM:PF04551 | PIRSF:PIRSF037336 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR30454 | SUPFAM:SSF56014 | TIGRFAMs:TIGR00612 |
| UniParc:UPI00001628E6 | SEG:seg | : | : | : | : |
Description
ISPG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4K0E8]
Coordinates
chr5:+:24358885..24363485
Molecular Weight (calculated)
82261.3 Da
IEP (calculated)
6.392
GRAVY (calculated)
-0.204
Length
741 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGVLPAPV SGIKIPDSKV GFGKSMNLVR ICDVRSLRSA RRRVSVIRNS NQGSDLAELQ PASEGSPLLV PRQKYCESLH KTVRRKTRTV MVGNVALGSE
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.