Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26422 | Soybean | nucleus, plastid | 86.17 | 86.64 |
| KRH22900 | Soybean | nucleus | 85.91 | 86.25 |
| Bra002468.1-P | Field mustard | plastid | 80.27 | 86.17 |
| VIT_06s0004g02900.t01 | Wine grape | plastid | 85.5 | 86.08 |
| TraesCS6A01G215500.1 | Wheat | plastid | 84.97 | 85.08 |
| EES07113 | Sorghum | plastid | 85.1 | 84.99 |
| HORVU6Hr1G054940.1 | Barley | plastid | 84.7 | 84.81 |
| TraesCS6D01G197800.1 | Wheat | plastid | 84.7 | 84.81 |
| Os02t0603800-01 | Rice | plastid | 84.43 | 84.54 |
| TraesCS6B01G245100.1 | Wheat | plastid | 84.43 | 84.54 |
| Solyc11g069380.1.1 | Tomato | plastid | 83.89 | 84.46 |
| PGSC0003DMT400020795 | Potato | cytosol, plastid | 83.76 | 84.32 |
| Zm00001d017139_P003 | Maize | plastid | 85.1 | 84.31 |
| CDY53637 | Canola | plastid | 83.22 | 84.24 |
| CDY31531 | Canola | plastid | 82.95 | 83.4 |
| AT5G60600.1 | Thale cress | plastid | 82.82 | 83.27 |
| CDY53636 | Canola | cytosol | 19.46 | 79.23 |
Protein Annotations
| KEGG:00900+1.17.7.3 | Gene3D:3.20.20.20 | Gene3D:3.30.413.10 | MapMan:9.1.2.7 | InterPro:Dihydropteroate_synth-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008299 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 | GO:GO:0009719 | GO:GO:0009862 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0016114 | GO:GO:0044237 | GO:GO:0046429 | GO:GO:0051539 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_Achr1G08940_001 | EnsemblPlants:GSMUA_Achr1P08940_001 | EnsemblPlants:GSMUA_Achr1T08940_001 | InterPro:IPR011005 | InterPro:IspG_atypical | InterPro:IspG_bac-typ |
| UniProt:M0RYA3 | HAMAP:MF_00159 | PFAM:PF04551 | PIRSF:PIRSF037336 | SUPFAM:SSF56014 | TIGRFAMs:TIGR00612 |
| UniParc:UPI0002959B6A | SEG:seg | : | : | : | : |
Description
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr1G08940_001]
Coordinates
chr1:+:6850635..6858692
Molecular Weight (calculated)
82693.7 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.228
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGAVPSSI PGLRTRDYGL SFAKSVDFAR VSCAPEQPRM KLRRRHAAVI RSSSNSGSEI VELESASEGS PLLVPRQKYC ESVHKTVRRK TRTVMVGNVA
101: LGSEHPIRIQ TMTTSDTKDV AKTVEEVIRI ADKGADLVRI TVQGKKEADA CFEIKNKLVQ KNYNIPLVAD IHFAPAVALR VAECFDKIRV NPGNFADRRA
201: QFETIEFTDD DYQKELEHIE KVFSPLVEKC KKYGRAMRIG TNHGSLSDRI MSYYGDSPRG MVESAFEFAR ICRKLDFHNF VFSMKASNPV VMVQAYRLLV
301: AEMYVQGWDY PLHLGVTEAG EGEDGRMKSA IGIGTLLQDG LGDTIRVSLT EPPEEEIDPC RRLANLGMQA ANLQKGTAPF EEKHRRYFDF QRRSGQLPVQ
401: KEGEEVDYRG VLHRDGSVLM SVSLDMLKTP ELLYKSLAAK LAVGMPFKDL ATVDSILLRE LPPLEDADAR LALKRLIDIS MGVVTPLSEQ LTKPLPNAIV
501: LVNLKQLSTG AYKLLPEGTR LAVTVRGDEP YEELDILKIV GDITMLLHDL PYSEDKLSRV HAARRLFEYL EGNSLNFPVI HHLQFPEQIH RDDLVIMAGS
601: SAGALLVDGL GDGVLLEASD QEYEFLRNTS FNLLQGCRMR NTKTEYVSCP SCGRTLFDLQ EISAQIREKT SHLPGVSIAI MGCIVNGPGE MADADFGYVG
701: GSPGKIDLYV GKTVVKRGIA MEHATEALIQ LIKDHGRWVD PPAED
101: LGSEHPIRIQ TMTTSDTKDV AKTVEEVIRI ADKGADLVRI TVQGKKEADA CFEIKNKLVQ KNYNIPLVAD IHFAPAVALR VAECFDKIRV NPGNFADRRA
201: QFETIEFTDD DYQKELEHIE KVFSPLVEKC KKYGRAMRIG TNHGSLSDRI MSYYGDSPRG MVESAFEFAR ICRKLDFHNF VFSMKASNPV VMVQAYRLLV
301: AEMYVQGWDY PLHLGVTEAG EGEDGRMKSA IGIGTLLQDG LGDTIRVSLT EPPEEEIDPC RRLANLGMQA ANLQKGTAPF EEKHRRYFDF QRRSGQLPVQ
401: KEGEEVDYRG VLHRDGSVLM SVSLDMLKTP ELLYKSLAAK LAVGMPFKDL ATVDSILLRE LPPLEDADAR LALKRLIDIS MGVVTPLSEQ LTKPLPNAIV
501: LVNLKQLSTG AYKLLPEGTR LAVTVRGDEP YEELDILKIV GDITMLLHDL PYSEDKLSRV HAARRLFEYL EGNSLNFPVI HHLQFPEQIH RDDLVIMAGS
601: SAGALLVDGL GDGVLLEASD QEYEFLRNTS FNLLQGCRMR NTKTEYVSCP SCGRTLFDLQ EISAQIREKT SHLPGVSIAI MGCIVNGPGE MADADFGYVG
701: GSPGKIDLYV GKTVVKRGIA MEHATEALIQ LIKDHGRWVD PPAED
001: MATGVLPAPV SGIKIPDSKV GFGKSMNLVR ICDVRSLRSA RRRVSVIRNS NQGSDLAELQ PASEGSPLLV PRQKYCESLH KTVRRKTRTV MVGNVALGSE
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
Arabidopsis Description
ISPG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4K0E8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.