Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07113 | Sorghum | plastid | 96.14 | 96.92 |
| Os02t0603800-01 | Rice | plastid | 93.09 | 94.09 |
| TraesCS6D01G197800.1 | Wheat | plastid | 91.89 | 92.88 |
| HORVU6Hr1G054940.1 | Barley | plastid | 91.76 | 92.74 |
| TraesCS6A01G215500.1 | Wheat | plastid | 91.76 | 92.74 |
| TraesCS6B01G245100.1 | Wheat | plastid | 91.49 | 92.47 |
| GSMUA_Achr1P08940_001 | Banana | plastid | 84.31 | 85.1 |
| Bra002468.1-P | Field mustard | plastid | 78.32 | 84.87 |
| CDY53637 | Canola | plastid | 80.98 | 82.74 |
| Solyc11g069380.1.1 | Tomato | plastid | 80.85 | 82.16 |
| AT5G60600.1 | Thale cress | plastid | 80.85 | 82.05 |
| PGSC0003DMT400020795 | Potato | cytosol, plastid | 80.59 | 81.89 |
| VIT_06s0004g02900.t01 | Wine grape | plastid | 80.45 | 81.76 |
| CDY31531 | Canola | plastid | 80.45 | 81.65 |
| KRH26422 | Soybean | nucleus, plastid | 80.32 | 81.51 |
| KRH22900 | Soybean | nucleus | 80.05 | 81.13 |
| CDY53636 | Canola | cytosol | 18.88 | 77.6 |
Protein Annotations
| KEGG:00900+1.17.7.3 | Gene3D:3.20.20.20 | Gene3D:3.30.413.10 | MapMan:9.1.2.7 | UniProt:A0A1D6HCJ3 | ProteinID:AQK72419.1 |
| ncoils:Coil | InterPro:Dihydropteroate_synth-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008299 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 |
| GO:GO:0009719 | GO:GO:0009862 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016114 | GO:GO:0044237 |
| GO:GO:0046429 | GO:GO:0051539 | GO:GO:0055114 | InterPro:IPR011005 | InterPro:IspG_atypical | InterPro:IspG_bac-typ |
| HAMAP:MF_00159 | PFAM:PF04551 | PIRSF:PIRSF037336 | SUPFAM:SSF56014 | TIGRFAMs:TIGR00612 | UniParc:UPI000843BED1 |
| EnsemblPlantsGene:Zm00001d017139 | EnsemblPlants:Zm00001d017139_P003 | EnsemblPlants:Zm00001d017139_T003 | SEG:seg | : | : |
Description
hydroxymethylbutenyl diphosphate synthase1 hydroxymethylbutenyl diphosphate synthase1
Coordinates
chr5:-:186706400..186712738
Molecular Weight (calculated)
82882.7 Da
IEP (calculated)
5.831
GRAVY (calculated)
-0.191
Length
752 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGVAPAPL PHVRVHHGGV GFTRSVDFAK VLSAPGAGTM RASSSRGRAL VAKSSSTGSE TMELEPSSEG SPLLVPRQKY CESTHQTRRR KTRTVMVGNV
101: PLGSDHPIRI QTMTTSDTKD VAKTVEEVMR IADKGADLVR ITVQGRKEAD ACFEIKNTLV QKNYNIPLVA DIHFAPTVAL RVAECFDKIR VNPGNFADRR
201: AQFEKLEYTD DDYQKELEHI EKVFSPLVEK CKQYGRAMRI GTNHGSLSDR IMSYYGDSPR GMVIISFLVE SALEFARICR KLDFHNFVFS MKASNPVIMV
301: QAYRLLVAEM YNLGWDYPLH LGVTEAGEGE DGRMKSAIGI GTLLMDGLGD TIRVSLTEPP EEEIDPCQRL ANLGTQAANL QIGVAPFEEK HRRYFDFQRR
401: SGQLPLQKEG EEVDYRNVLH RDGSVLMSVS LDQLKAPDLL YRSLAAKLVV GMPFKDLATV DSILLRELPP VEDAEARLAL KRLVDISMGV LAPLSEQLTK
501: PLPHAIVLVN LDELSSGAHK LLPEGTRLAV TLRGDESYEQ LDILKDVDDI TMLLHNVPYG EEKTGRVHAA RRLFEYLQAN GLNFPVIHHI NFPETIDRDG
601: LVIGAGANVG ALLVDGLGDG VFLEAADQEF EFLRDTSFNL LQGCRMRNTK TEYVSCPSCG RTLFDLQEIS AEIREKTSHL PGVSIAIMGC IVNGPGEMAD
701: ADFGYVGGAP GKIDLYVGKT VVQRAIAMEG ATDALIQLIK DHGRWVDPPA EE
101: PLGSDHPIRI QTMTTSDTKD VAKTVEEVMR IADKGADLVR ITVQGRKEAD ACFEIKNTLV QKNYNIPLVA DIHFAPTVAL RVAECFDKIR VNPGNFADRR
201: AQFEKLEYTD DDYQKELEHI EKVFSPLVEK CKQYGRAMRI GTNHGSLSDR IMSYYGDSPR GMVIISFLVE SALEFARICR KLDFHNFVFS MKASNPVIMV
301: QAYRLLVAEM YNLGWDYPLH LGVTEAGEGE DGRMKSAIGI GTLLMDGLGD TIRVSLTEPP EEEIDPCQRL ANLGTQAANL QIGVAPFEEK HRRYFDFQRR
401: SGQLPLQKEG EEVDYRNVLH RDGSVLMSVS LDQLKAPDLL YRSLAAKLVV GMPFKDLATV DSILLRELPP VEDAEARLAL KRLVDISMGV LAPLSEQLTK
501: PLPHAIVLVN LDELSSGAHK LLPEGTRLAV TLRGDESYEQ LDILKDVDDI TMLLHNVPYG EEKTGRVHAA RRLFEYLQAN GLNFPVIHHI NFPETIDRDG
601: LVIGAGANVG ALLVDGLGDG VFLEAADQEF EFLRDTSFNL LQGCRMRNTK TEYVSCPSCG RTLFDLQEIS AEIREKTSHL PGVSIAIMGC IVNGPGEMAD
701: ADFGYVGGAP GKIDLYVGKT VVQRAIAMEG ATDALIQLIK DHGRWVDPPA EE
001: MATGVLPAPV SGIKIPDSKV GFGKSMNLVR ICDVRSLRSA RRRVSVIRNS NQGSDLAELQ PASEGSPLLV PRQKYCESLH KTVRRKTRTV MVGNVALGSE
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
101: HPIRIQTMTT SDTKDITGTV DEVMRIADKG ADIVRITVQG KKEADACFEI KDKLVQLNYN IPLVADIHFA PTVALRVAEC FDKIRVNPGN FADRRAQFET
201: IDYTEDEYQK ELQHIEQVFT PLVEKCKKYG RAMRIGTNHG SLSDRIMSYY GDSPRGMVES AFEFARICRK LDYHNFVFSM KASNPVIMVQ AYRLLVAEMY
301: VHGWDYPLHL GVTEAGEGED GRMKSAIGIG TLLQDGLGDT IRVSLTEPPE EEIDPCRRLA NLGTKAAKLQ QGVAPFEEKH RHYFDFQRRT GDLPVQKEGE
401: EVDYRNVLHR DGSVLMSISL DQLKAPELLY RSLATKLVVG MPFKDLATVD SILLRELPPV DDQVARLALK RLIDVSMGVI APLSEQLTKP LPNAMVLVNL
501: KELSGGAYKL LPEGTRLVVS LRGDEPYEEL EILKNIDATM ILHDVPFTED KVSRVHAARR LFEFLSENSV NFPVIHHINF PTGIHRDELV IHAGTYAGGL
601: LVDGLGDGVM LEAPDQDFDF LRNTSFNLLQ GCRMRNTKTE YVSCPSCGRT LFDLQEISAE IREKTSHLPG VSIAIMGCIV NGPGEMADAD FGYVGGSPGK
701: IDLYVGKTVV KRGIAMTEAT DALIGLIKEH GRWVDPPVAD E
Arabidopsis Description
ISPG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4K0E8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.