Factsheet for Bra006272.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra030018.1-P
Bra036090.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14910.1	Bra030018.1-P	AT3G50560.1	21798944
AT5G14910.1	Bra036090.1-P	AT3G50560.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G14910.1	Thale cress	plastid	81.87	83.71
Bra023492.1-P	Field mustard	plastid	81.32	82.68
VIT_14s0066g01780.t01	Wine grape	plastid	49.45	49.18
KRH18591	Soybean	plastid	47.25	46.49
PGSC0003DMT400001367	Potato	plastid	46.15	45.16
Solyc02g087150.2.1	Tomato	plastid	46.15	45.16
KRG93395	Soybean	nucleus, plastid	45.6	45.11
GSMUA_Achr8P09820_001	Banana	plastid	46.7	44.27
EES05886	Sorghum	plastid	34.07	39.74
Zm00001d038047_P001	Maize	plastid	34.62	39.13
Os05t0337400-01	Rice	extracellular, nucleus, plasma membrane, plastid	34.62	38.41
CDX78599	Canola	plastid	96.7	38.18
CDX70580	Canola	plastid	95.05	35.74
HORVU1Hr1G064750.1	Barley	plastid	32.97	35.29
TraesCS1B01G270000.1	Wheat	plastid	32.42	34.71
TraesCS1D01G259500.1	Wheat	plastid	32.97	34.48
TraesCS1A01G259700.2	Wheat	plastid	31.32	28.79

Protein Annotations

MapMan:17.7.2.3.3	Gene3D:3.30.70.100	EnsemblPlantsGene:Bra006272	EnsemblPlants:Bra006272.1	EnsemblPlants:Bra006272.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	UniProt:M4CPY3	PFscan:PS50846	PANTHER:PTHR35756	SUPFAM:SSF55008
UniParc:UPI000253FBB1	SEG:seg	:	:	:	:

Description

AT5G14910 (E=1e-072) | heavy-metal-associated domain-containing protein

Coordinates

chrA03:+:2774720..2775902

Molecular Weight (calculated)

19366.8 Da

IEP (calculated)

4.522

GRAVY (calculated)

-0.140

Length

182 amino acids

Sequence
(BLAST)

001: MASIAASSTF HSLSTAKSPN LSSTHLSKNL TFRTRPIENS RVCSFSAFTK QSRLGLRKLS CLGEGGGEGV AIADEEQQQQ QQQQETVSVP VSPSDMLTMF
101: FQADGTLNEA AIPNVTKALQ DIDGVSNLKV QVSEGVAVVE LSKQTTVQAT GVASSLVETI QGAGFKLQTL NLSFEDEDEV LV

Best Arabidopsis Sequence Match ( AT5G14910.2 )
(BLAST)

001: MASIAASSTF HSFCRTKSPN LSSTHLLPLS KNLNFRTRAI GNSRNCSFAG FIKQNRLGLR KLSSIGEGGE GVAVAEEQPQ ETVSVPVSPS DMLTMFFQAD
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV

Arabidopsis Description

AT5g14910/F2G14_30 [Source:UniProtKB/TrEMBL;Acc:Q93VK7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.