Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra030018.1-P | |
| Bra036090.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14910.1 | Bra030018.1-P | AT3G50560.1 | 21798944 |
| AT5G14910.1 | Bra036090.1-P | AT3G50560.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85578 | Canola | plastid | 91.06 | 92.09 |
| CDX91016 | Canola | plastid | 83.24 | 86.13 |
| Bra006272.1-P | Field mustard | plastid | 82.68 | 81.32 |
| AT5G14910.1 | Thale cress | plastid | 79.89 | 80.34 |
| VIT_14s0066g01780.t01 | Wine grape | plastid | 50.28 | 49.18 |
| PGSC0003DMT400001367 | Potato | plastid | 48.6 | 46.77 |
| Solyc02g087150.2.1 | Tomato | plastid | 47.49 | 45.7 |
| KRG93395 | Soybean | nucleus, plastid | 45.81 | 44.57 |
| GSMUA_Achr8P09820_001 | Banana | plastid | 47.49 | 44.27 |
| KRH18591 | Soybean | plastid | 45.25 | 43.78 |
| EES05886 | Sorghum | plastid | 35.75 | 41.03 |
| Zm00001d038047_P001 | Maize | plastid | 35.2 | 39.13 |
| Os05t0337400-01 | Rice | extracellular, nucleus, plasma membrane, plastid | 35.75 | 39.02 |
| TraesCS1D01G259500.1 | Wheat | plastid | 36.87 | 37.93 |
| HORVU1Hr1G064750.1 | Barley | plastid | 35.75 | 37.65 |
| TraesCS1B01G270000.1 | Wheat | plastid | 35.2 | 37.06 |
| TraesCS1A01G259700.2 | Wheat | plastid | 34.64 | 31.31 |
Protein Annotations
| MapMan:17.7.2.3.3 | Gene3D:3.30.70.100 | EnsemblPlantsGene:Bra023492 | EnsemblPlants:Bra023492.1 | EnsemblPlants:Bra023492.1-P | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009941 | GO:GO:0016020 | GO:GO:0030001 | GO:GO:0046872 |
| InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | UniProt:M4E3Y9 | PFAM:PF00403 | PFscan:PS50846 |
| PANTHER:PTHR35756 | SUPFAM:SSF55008 | UniParc:UPI00025435DD | SEG:seg | : | : |
Description
AT5G14910 (E=1e-057) | heavy-metal-associated domain-containing protein
Coordinates
chrA02:+:3611889..3612913
Molecular Weight (calculated)
18959.5 Da
IEP (calculated)
4.481
GRAVY (calculated)
-0.022
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MASITASSTF HSLSTTKSLN LSSTLLLPPS KNLTFRSKPI GSSRVCIFTK QNRLGLRKLS SLGEGGEAVA VADDEQQQQQ QETVSVPVSP SDMLTMFFQA
101: DGTLNEAAVP NVTKALQDID GVSNLKVQVA EGVAVVELSK QTTVQATGVA SSLVETIQGA GFKLQTLNLS FEDEDEVLV
101: DGTLNEAAVP NVTKALQDID GVSNLKVQVA EGVAVVELSK QTTVQATGVA SSLVETIQGA GFKLQTLNLS FEDEDEVLV
001: MASIAASSTF HSFCRTKSPN LSSTHLLPLS KNLNFRTRAI GNSRNCSFAG FIKQNRLGLR KLSSIGEGGE GVAVAEEQPQ ETVSVPVSPS DMLTMFFQAD
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
Arabidopsis Description
AT5g14910/F2G14_30 [Source:UniProtKB/TrEMBL;Acc:Q93VK7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.