Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14910.1 | CDY52823 | AT3G50560.1 | 21798944 |
| AT5G14910.1 | CDY65018 | AT3G50560.1 | 21798944 |
| AT5G14910.1 | CDY65649 | AT3G50560.1 | 21798944 |
| AT5G14910.1 | CDY67513 | AT3G50560.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023492.1-P | Field mustard | plastid | 86.13 | 83.24 |
| CDX85578 | Canola | plastid | 84.97 | 83.05 |
| AT5G14910.1 | Thale cress | plastid | 79.77 | 77.53 |
| VIT_14s0066g01780.t01 | Wine grape | plastid | 51.45 | 48.63 |
| GSMUA_Achr8P09820_001 | Banana | plastid | 49.13 | 44.27 |
| PGSC0003DMT400001367 | Potato | plastid | 47.4 | 44.09 |
| Solyc02g087150.2.1 | Tomato | plastid | 46.82 | 43.55 |
| KRG93395 | Soybean | nucleus, plastid | 45.66 | 42.93 |
| KRH18591 | Soybean | plastid | 45.09 | 42.16 |
| EES05886 | Sorghum | plastid | 36.99 | 41.03 |
| Zm00001d038047_P001 | Maize | plastid | 36.42 | 39.13 |
| Os05t0337400-01 | Rice | extracellular, nucleus, plasma membrane, plastid | 36.99 | 39.02 |
| HORVU1Hr1G064750.1 | Barley | plastid | 36.99 | 37.65 |
| TraesCS1B01G270000.1 | Wheat | plastid | 36.42 | 37.06 |
| TraesCS1D01G259500.1 | Wheat | plastid | 36.99 | 36.78 |
| CDX78599 | Canola | plastid | 82.66 | 31.02 |
| TraesCS1A01G259700.2 | Wheat | plastid | 35.26 | 30.81 |
| CDX70580 | Canola | plastid | 82.08 | 29.34 |
Protein Annotations
| EnsemblPlants:CDX91016 | EnsemblPlantsGene:GSBRNA2T00151779001 | Gene3D:3.30.70.100 | GO:A0A078DP86 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PANTHER:PTHR35756 | PFAM:PF00403 | PFscan:PS50846 | ProteinID:CDX91016 | ProteinID:CDX91016.1 |
| SEG:seg | SUPFAM:SSF55008 | UniParc:UPI0004EE072E | MapMan:17.7.2.3.3 | : | : |
Description
BnaC02g05810D
Coordinates
chrLK031865:-:344181..345260
Molecular Weight (calculated)
18188.6 Da
IEP (calculated)
4.444
GRAVY (calculated)
0.042
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MASITASSTF RSLSTTKSPN LSSTHLLPLS KNHSRVCIFT KQNPLGLRKL SSLGQGGEAV AVAVAVADEE QQQQQEAVSV PVSPSDMLTM FFQADGTLND
101: AAIPNVTKAL QDIDGVSNLK VQVAEGVAVV ELSKQTTVQA TGVASSLVET IQGAGFKLQT LNLSFEDEDE VLV
101: AAIPNVTKAL QDIDGVSNLK VQVAEGVAVV ELSKQTTVQA TGVASSLVET IQGAGFKLQT LNLSFEDEDE VLV
001: MASIAASSTF HSFCRTKSPN LSSTHLLPLS KNLNFRTRAI GNSRNCSFAG FIKQNRLGLR KLSSIGEGGE GVAVAEEQPQ ETVSVPVSPS DMLTMFFQAD
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
Arabidopsis Description
AT5g14910/F2G14_30 [Source:UniProtKB/TrEMBL;Acc:Q93VK7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.