Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14910.1 | CDY52823 | AT3G50560.1 | 21798944 |
| AT5G14910.1 | CDY65018 | AT3G50560.1 | 21798944 |
| AT5G14910.1 | CDY65649 | AT3G50560.1 | 21798944 |
| AT5G14910.1 | CDY67513 | AT3G50560.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023492.1-P | Field mustard | plastid | 92.09 | 91.06 |
| CDX91016 | Canola | plastid | 83.05 | 84.97 |
| AT5G14910.1 | Thale cress | plastid | 84.18 | 83.71 |
| VIT_14s0066g01780.t01 | Wine grape | plastid | 51.41 | 49.73 |
| Solyc02g087150.2.1 | Tomato | plastid | 49.72 | 47.31 |
| PGSC0003DMT400001367 | Potato | plastid | 49.72 | 47.31 |
| GSMUA_Achr8P09820_001 | Banana | plastid | 49.15 | 45.31 |
| KRG93395 | Soybean | nucleus, plastid | 46.33 | 44.57 |
| KRH18591 | Soybean | plastid | 45.76 | 43.78 |
| EES05886 | Sorghum | plastid | 35.59 | 40.38 |
| Os05t0337400-01 | Rice | extracellular, nucleus, plasma membrane, plastid | 36.16 | 39.02 |
| Zm00001d038047_P001 | Maize | plastid | 35.03 | 38.51 |
| TraesCS1D01G259500.1 | Wheat | plastid | 37.29 | 37.93 |
| HORVU1Hr1G064750.1 | Barley | plastid | 36.16 | 37.65 |
| TraesCS1B01G270000.1 | Wheat | plastid | 35.59 | 37.06 |
| CDX78599 | Canola | plastid | 84.18 | 32.32 |
| TraesCS1A01G259700.2 | Wheat | plastid | 35.03 | 31.31 |
| CDX70580 | Canola | plastid | 84.18 | 30.79 |
Protein Annotations
| MapMan:17.7.2.3.3 | Gene3D:3.30.70.100 | GO:A0A078DE63 | EnsemblPlants:CDX85578 | ProteinID:CDX85578 | ProteinID:CDX85578.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 |
| EnsemblPlantsGene:GSBRNA2T00143298001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | PFAM:PF00403 | PFscan:PS50846 |
| PANTHER:PTHR35756 | SUPFAM:SSF55008 | UniParc:UPI0004EEDC41 | SEG:seg | : | : |
Description
BnaA02g02350D
Coordinates
chrLK031842:-:728031..729148
Molecular Weight (calculated)
18796.3 Da
IEP (calculated)
4.765
GRAVY (calculated)
-0.038
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MATITASSTF HSLSTTKSLN LSSTHLLPPS KNLTFRSKPI GNSRICIFTK QNRLGLRKLS SLGEGGEAVA VAEDEQQQKE TVSVPVSPSD MLTMFFQADG
101: TLNEAAVPNV TKALQDIDGV SNLKVQVAEG VAVVELSKQT TVQATGVASS LVETIQGAGF KLQTLNLSFE DEDEVLV
101: TLNEAAVPNV TKALQDIDGV SNLKVQVAEG VAVVELSKQT TVQATGVASS LVETIQGAGF KLQTLNLSFE DEDEVLV
001: MASIAASSTF HSFCRTKSPN LSSTHLLPLS KNLNFRTRAI GNSRNCSFAG FIKQNRLGLR KLSSIGEGGE GVAVAEEQPQ ETVSVPVSPS DMLTMFFQAD
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
Arabidopsis Description
AT5g14910/F2G14_30 [Source:UniProtKB/TrEMBL;Acc:Q93VK7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.