Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G270000.1 | Wheat | plastid | 91.38 | 93.53 |
| HORVU1Hr1G064750.1 | Barley | plastid | 85.63 | 87.65 |
| TraesCS1A01G259700.2 | Wheat | plastid | 93.1 | 81.82 |
| Zm00001d038047_P001 | Maize | plastid | 64.94 | 70.19 |
| EES05886 | Sorghum | plastid | 60.92 | 67.95 |
| Os05t0337400-01 | Rice | extracellular, nucleus, plasma membrane, plastid | 61.49 | 65.24 |
| CDX85578 | Canola | plastid | 37.93 | 37.29 |
| CDX91016 | Canola | plastid | 36.78 | 36.99 |
| GSMUA_Achr8P09820_001 | Banana | plastid | 40.8 | 36.98 |
| Bra023492.1-P | Field mustard | plastid | 37.93 | 36.87 |
| AT5G14910.1 | Thale cress | plastid | 37.36 | 36.52 |
| VIT_14s0066g01780.t01 | Wine grape | plastid | 36.78 | 34.97 |
| KRG93395 | Soybean | nucleus, plastid | 35.06 | 33.15 |
| Bra006272.1-P | Field mustard | plastid | 34.48 | 32.97 |
| KRH18591 | Soybean | plastid | 34.48 | 32.43 |
| PGSC0003DMT400001367 | Potato | plastid | 34.48 | 32.26 |
| Solyc02g087150.2.1 | Tomato | plastid | 33.91 | 31.72 |
| CDX78599 | Canola | plastid | 35.06 | 13.23 |
| CDX70580 | Canola | plastid | 35.63 | 12.81 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G259500.1 | EnsemblPlantsGene:TraesCS1D01G259500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:IPR006121 | PANTHER:PTHR35756 | SEG:seg |
| TIGR:cd00371 | MapMan:17.7.2.3.3 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:352394896..352396858
Molecular Weight (calculated)
17861.3 Da
IEP (calculated)
4.563
GRAVY (calculated)
0.140
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMLSPASTH LLRSGSAPAA PLLPRRASLQ LSCVAGGAAP RSRRRSGRLE VVRAATAEVA EAAGAPAYTS ESLILYFKAE GTMEERAVPK ITQALEGMDG
101: VTDLEVLIEE GIGSVVLTKA TTVQATGVAS NLVEAIQGVG FKLQTLSLSF EDFDKADAAA AAVTGEGADV QASE
101: VTDLEVLIEE GIGSVVLTKA TTVQATGVAS NLVEAIQGVG FKLQTLSLSF EDFDKADAAA AAVTGEGADV QASE
001: MASIAASSTF HSFCRTKSPN LSSTHLLPLS KNLNFRTRAI GNSRNCSFAG FIKQNRLGLR KLSSIGEGGE GVAVAEEQPQ ETVSVPVSPS DMLTMFFQAD
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
101: GTLNEAAIPN VTRALQDIDG VSNLKVQVSE GVAVVELLKQ TTVQATGVAS NLVETIQGAG FKLQTLNLSF EDDDEVLV
Arabidopsis Description
AT5g14910/F2G14_30 [Source:UniProtKB/TrEMBL;Acc:Q93VK7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.